Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq152 86.0 7e-12 seq2216 84.2 2e-11 seq4050 82.4 8e-11 >seq152 Length=50040 Score = 86.0 bits (94), Expect = 7e-12 Identities = 66/77 (86%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 18847 TGATGGGAGTGTGGCGGAATCGGTAGACGCACCAGACTTAAAATCTGTTGAGAATTAATC 18906 ||||| | ||||||||||||||||||||| |||||||||||||||||| | ||| ||| Sbjct 8426 TGATGCGCTTGTGGCGGAATCGGTAGACGCTGCAGACTTAAAATCTGTTG-GGATTTATC 8484 Query 18907 TCGTGGGGGTTCAAGTC 18923 |||| | ||||||||| Sbjct 8485 CCGTGCGAGTTCAAGTC 8501 >seq2216 Length=5131 Score = 84.2 bits (92), Expect = 2e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 154521 TAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGCCACAGGTTCGAGTCC 154576 |||||||| |||||||||||||||||||||||||||| |||| |||||||||||| Sbjct 4445 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTAGGCCGGAGGTTCGAGTCC 4500 >seq4050 Length=57342 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 154514 GGGTCAGTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGCCACAGGTTCGAG 154573 || || ||||||||| |||||||||||||||||||||||||||| |||| | |||||||| Sbjct 43937 GGTTCCGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTAGGCCTCGGGTTCGAG 43996 Query 154574 TCC 154576 || Sbjct 43997 CCC 43999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545238845623920