Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq149 295 2e-74 seq3883 224 3e-53 seq4903 197 4e-45 seq1732 183 1e-40 seq4542 167 7e-36 seq2107 140 1e-27 seq1577 131 5e-25 seq3990 120 1e-21 seq2727 98.7 3e-15 seq4580 91.5 5e-13 seq1600 87.8 6e-12 >seq149 Length=58343 Score = 295 bits (326), Expect = 2e-74 Identities = 586/856 (68%), Gaps = 29/856 (3%) Strand=Plus/Plus Query 188758 aaaTCTAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACA 188817 || |||||||| ||||| | || | || |||| || ||||| | |||| ||||| Sbjct 19586 AAGTCTAATGTGATTTTAATCGGTTCAACCGGTTGCGGAAAAACGCTTCTTGCGCAAACG 19645 Query 188818 TTGGCTGATATGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCT 188877 |||| | || ||| |||| || | || || ||||||| || | ||||| ||||| Sbjct 19646 CTGGCAAAGATTTTAAATGTTCCGTTTGCGATTGCTGATGCCACCACCTTAACTGAAGCA 19705 Query 188878 GGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATC-----CAAGCAGCTG 188932 |||||||| ||||||||||||||||| ||||| | | || | ||| || Sbjct 19706 GGTTATGTTGGTGAAGATGTGGAAAA--TATTGTAT---TAAAGCTGGTGCAAAATGCCA 19760 Query 188933 ATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAAATTG 188992 |||||||||||||| ||| | || ||||| | ||||| |||||| | ||||||||| Sbjct 19761 ATTACGATATCGAAAAAGCTCAGCGCGGAATAATTTATATTGATGAAATCGATAAAATTT 19820 Query 188993 CTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAG 189052 | |||||| || | | ||||| || || ||||| || || || || || || |||| Sbjct 19821 CGAGAAAAGGTGATGGGCCGTCCATAACGCGTGATGTTTCGGGAGAGGGTGTGCAACAAG 19880 Query 189053 CTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAAC 189112 | | || ||||| ||||||| || ||||| || |||||||| ||||| || || |||| Sbjct 19881 CGCTTTTGAAAATTGTTGAAGGCACTGTTGCCAATGTTCCTCCGCAAGGCGGGCGCAAAC 19940 Query 189113 ACCCTCACCAAGAAATGCTTGAAATAGATACAACTAATATCTTGTTTATTCTTGGTGGAG 189172 | || || || ||| | | | | ||||| |||||||| | |||||| ||||| | Sbjct 19941 ATCCGCAACAGGAATTTTTGCATGTTGATACCACTAATATTCTCTTTATTTGCGGTGGCG 20000 Query 189173 CGTTTGATGGTCTTGAAAACATTATCAAGAGACGCGCTAC---AAAATCAA---CTTTAG 189226 | |||| || | ||||| ||| | || || | ||| ||| |||| || | | Sbjct 20001 CTTTTGCCGGATTGGAAAAAATTGTTGAGCAACATGGTACGGAAAACTCAAATTCTATCG 20060 Query 189227 GTTTTGATGATAGTGTAGATAAAGTACAAGAAGAAATCAAGGATGACAATAAAGTATTCC 189286 |||||| || || ||| || |||| |||| | ||| || | | | || |||| Sbjct 20061 GTTTTGGTGCTAATGTTGAAAAAG-ACAATA--AAACCATCG--GCC----AAATATTAA 20111 Query 189287 AACATCTTCAACCGCAAGATATTGTTAAGTATGGTTTAATTCCAGAATTTATTGGGCGTG 189346 || || ||| ||| ||||| | |||| || || | |||||||||||| || ||| Sbjct 20112 AAGATGTTCGTCCGGAAGATTTGATTAAATACGGACTTATTCCAGAATTTGCCGGTCGTA 20171 Query 189347 TACCAGTAATCGCAACTCTTAACAAACTTGATCG-AGATGCATTGATTAACATTTTAACT 189405 | || || || || || ||| | | |||| || ||| || |||||||| ||||||| Sbjct 20172 TGCCGGTTATAGCCACGCTTGA-TGATTTGAACGAAGAAGCTTTGATTAAGGTTTTAACC 20230 Query 189406 GAGCCGCAAAACGCTATCATTAAACAATATCAGAAATTGTTAGATATGGATGGCGTGGAA 189465 |||||| ||||||| | | | |||||| ||||| ||||||||| ||| || Sbjct 20231 GAGCCGAAAAACGCGCTTGTCAGCCAATATACCTCTTTGTTTAATATGGATGAGGTGAAA 20290 Query 189466 TTAGA-ATTCCAAAAAGAAGCATTAGAATCAATTGCAGATGAAGCGATTGAACGTAATAC 189524 ||| | ||| | | | |||| ||| | |||||| | | ||||||||||| || || Sbjct 20291 TTAAATATTACCGATA-AAGCCTTAAGGGCGATTGCAACTAAGGCGATTGAACGCAAAAC 20349 Query 189525 TGGTGCTCGCGGATTACAATCCATTATTGAAAATATTATGTTAGATGTAATGTATGAAGT 189584 || || | || || | ||||||| ||| | ||| || | || ||||||||| | Sbjct 20350 CGGCGCCAGAGGCTTGCGTGCCATTATGGAAGAAATTTTGATGGAATGGATGTATGAATT 20409 Query 189585 TCCAGCTCGAAAAGAT 189600 || | | ||| ||| Sbjct 20410 GCCGGATAAAAAGGAT 20425 >seq3883 Length=45967 Score = 224 bits (248), Expect = 3e-53 Identities = 618/926 (67%), Gaps = 42/926 (5%) Strand=Plus/Plus Query 188674 TTAGCTGTATCAGTTTATAATCATTATAAGCGCATTAATGCTCTTAATGaaaaatcaaaa 188733 ||| ||||| | || ||||||||||||||||| || |||| | ||| || Sbjct 13858 TTATCTGTAGCTGTATATAATCATTATAAGCGTAT----------AATGGCAGATCCAAC 13907 Query 188734 aatgatgatgga-gtaaagat-caaaaaaTCTAATGTTCTTTTAGTTGGCCCTACTGGTT 188791 | ||| || || || || | || || | | ||||||||| | | || ||||| |||| Sbjct 13908 A--GAT-ATAGATGTTGAGCTTCAGAAGAGC-AATGTTCTTATGCTAGGACCTACAGGTT 13963 Query 188792 CAGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATGTACCTCTAGCTATCT 188851 |||| || |||||||| ||||| || |||||| ||| | ||| ||| | ||||| Sbjct 13964 CAGGAAAGACATTATTAGCTCAGACTTTGGCTCGTATTATTGGTGTTCCTTTTGCTATTG 14023 Query 188852 CTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGC 188911 ||||||| || | | ||||| || || ||||| ||||| ||||| || || ||| | Sbjct 14024 CTGATGCTACAACACTCACAGAGGCAGGATATGTTGGTGAGGATGTTGAGAA--TATC-C 14080 Query 188912 TTC----GTTTAATCCAAGCAGCTGATTACGATATCGAATTAG-CGGAACGTGGAATTGT 188966 ||| | ||| || | |||||||||| |||| | ||| || | || ||| ||||| Sbjct 14081 TTCTCAAGCTTATTC-AGGCAGCTGATTTCGATGT-GAAGAAGGCAGAGATTGGTATTGT 14138 Query 188967 ATATATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGA 189026 ||||| ||||| |||| ||||| | | || ||||| | ||| ||||| |||| Sbjct 14139 TTATATTGATGAGATAGACAAAATCACCAAGAAGTCAGAGAATGTATCAATTACAAGAGA 14198 Query 189027 TGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAA 189086 |||||| || || || |||||||| || | | || || ||||| ||||| ||||| || Sbjct 14199 TGTATCCGGTGAGGGTGTACAGCAGGCGCTTCTCAAGATAATTGAGGGTACTGTTGCAAA 14258 Query 189087 AGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAATAGATACAAC 189146 ||||| ||||| ||||||||||| || || || || || | || || ||||| | Sbjct 14259 TGTTCCACCTCAGGGTGGTCGTAAGCATCCACAGCAGGAGACTATTCCTATCGATACCAA 14318 Query 189147 TAATATCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAAACATTATC---AAGAG 189203 ||||| | ||||| |||||| || ||||| || | || || |||||| || | Sbjct 14319 GAATATTCTCTTTATCTGTGGTGGCGCATTTGAGGGCTTAGAGAAGATTATCTCACAGCG 14378 Query 189204 ACGCGCTACAAAATCAACTTTAGGTTTTGATGATAGTGTAGATAAAGTACAAGAAGAAA- 189262 | | || | ||| || ||||||| || || | |||||| | ||||| ||| Sbjct 14379 AACAGATA-GCAGTCAGATT--GGTTTTGGTG-CAG---ATATAAAGGATAAGAATAAAC 14431 Query 189263 TCAAGGATGACAATAAAGTATTCCAACATCTTCAACCGCAAGATATTGTTAAGTATGGTT 189322 |||| || || | || | || || || || ||| | | |||| |||| Sbjct 14432 AAAAGGTTG---ATGATTTACTTCAGCAGGCATTGCCACAGGATTTCATCAAGTTTGGTC 14488 Query 189323 TAATTCCAGAATTTATTGGGCGTGTACCAGTAATCGCAACTCTTAACAAACTTGATCGA- 189381 | ||||| |||||||| || ||||| || | | | |||| || ||||| | ||| Sbjct 14489 TTATTCCGGAATTTATCGGACGTGTGCCTATCAATGTTTCTCTCAAGGAACTT-ACCGAG 14547 Query 189382 GATGCATTGATTAACATTTTAACTGAGCCGCAAAACGCTATCATTAAACAATATCAGAAA 189441 |||| |||||| ||| | | || || | || || | | || || ||| || | Sbjct 14548 GATGATATGATTAGAATTCTTAGAGAACCTAAGAATTCTCTTACAAAGCAGTATGAGGCA 14607 Query 189442 TTGTTAGATATGGATGGCGTGGAATTAGAATTCCAAAAAGAAGCATTAGAATCAATTGCA 189501 || || | |||||||| || | | ||||| || | || || ||| |||||| Sbjct 14608 TTATTTAAGATGGATGGTGTACATCTTGAATTTGAAGATGATGCTTTACGTGAGATTGCA 14667 Query 189502 GATGAAGCGATTGAACGTAATACTGGTGCTCGCGGATTACAATCCATTATTGAAAATATT 189561 | || | || ||| | || ||||||||| | || || | | ||| |||| | | || Sbjct 14668 AAGAAATCAATCGAAAGAAAGACTGGTGCTAGAGGCCTAAGAGCGATTGTTGAGAGTGTT 14727 Query 189562 ATGTTAGATGTAATGTATGAAGTTCC 189587 ||| | || |||||| | ||||| Sbjct 14728 ATGATGGACCATATGTATCATGTTCC 14753 >seq4903 Length=12164 Score = 197 bits (218), Expect = 4e-45 Identities = 319/459 (69%), Gaps = 0/459 (0%) Strand=Plus/Minus Query 188739 tgatggagtaaagatcaaaaaaTCTAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAA 188798 ||||| || || ||| ||||||| ||||||||||| ||||||| ||||| || || Sbjct 9595 TGATGATGTGAAAATCGAAAAATCAAATGTTCTTTTGATTGGCCCGACTGGAAGCGGAAA 9536 Query 188799 AACATTATTTGCTCAAACATTGGCTGATATGTTACATGTACCTCTAGCTATCTCTGATGC 188858 ||| | |||| | || |||||||| | | | | || ||| | || ||| | ||||| Sbjct 9535 AACCCTTCTTGCGCGCACTTTGGCTGAAAAGCTTAAAGTTCCTTTTGCAATCGCAGATGC 9476 Query 188859 AACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTT 188918 || | | || ||||| || ||||| ||||||||||| || || || | | | Sbjct 9475 CACCACCCTCACGGAAGCCGGCTATGTCGGTGAAGATGTCGAGAATGTCCTTTTAAAGCT 9416 Query 188919 AATCCAAGCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATCGATGA 188978 ||| | || ||||| | || | || || || ||||| | | || || || Sbjct 9415 CATCAATGCGGCTGACGGAAACATAGCTCAGGCAGAGCGAGGAATCATCTTCATTGACGA 9356 Query 188979 AGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTATCTGGCGA 189038 | | || ||||| | |||||| || | ||||||||| ||||| ||||| |||||||| Sbjct 9355 AATTGACAAAATCGGCAGAAAAAGCGAGAACACATCCATAACCCGCGATGTTTCTGGCGA 9296 Query 189039 AGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCA 189098 ||||| ||||| || | | ||||| || ||||| || || |||||||||||| Sbjct 9295 GGGAGTTCAGCAGGCGCTCCTTAAAATTATCGAAGGAACTCAGGCCTCAGTTCCTCCTCA 9236 Query 189099 AGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAATAGATACAACTAATATCTTGTT 189158 || || || || ||||| | || ||||||||| | || || ||| | || ||| | || Sbjct 9235 GGGCGGGCGAAAGCACCCGAATCAGGAAATGCTTCAGATTGACACATCGAACATCCTCTT 9176 Query 189159 TATTCTTGGTGGAGCGTTTGATGGTCTTGAAAACATTAT 189197 ||||||||| ||||| || | |||||||| || || || Sbjct 9175 TATTCTTGGAGGAGCCTTCGTCGGTCTTGACAAAATCAT 9137 >seq1732 Length=72554 Score = 183 bits (202), Expect = 1e-40 Identities = 312/448 (70%), Gaps = 7/448 (2%) Strand=Plus/Minus Query 188753 tcaaaaaaTCTAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTC 188812 |||||||| |||||| | | |||||||||| || || ||||| ||| | || |||| Sbjct 58033 TCAAAAAAG-TAATGTGTTGATGCTTGGCCCTACCGGCTCCGGTAAGACACTTTTAGCTC 57975 Query 188813 AAACATTGGCTGATATGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAG 188872 | || |||||| | || || ||| | ||||| | ||||| || | | |||| Sbjct 57974 AGACGTTGGCTAGAGTACTAGGCGTGCCTTTTGCTATAGCAGATGCTACCACCCTTACAG 57915 Query 188873 AAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATC---CAAGCAG 188929 | || || ||||| ||||| ||||| || || |||| |||| | || || |||| Sbjct 57914 AGGCCGGATATGTTGGTGAGGATGTAGAGAA--TATT-CTTCTCAAACTCATTCAGGCAG 57858 Query 188930 CTGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAAA 188989 |||| | |||||| || ||| || || || |||||||| ||||| | ||||| | Sbjct 57857 CTGACTTTGATATCAAAAAAGCCGAGATAGGTATCGTATATATAGATGAGATTGATAAGA 57798 Query 188990 TTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGC 189049 | | | |||||| || | ||| || || ||||||| || || || || ||||||| Sbjct 57797 TAACCAAAAAATCTGAGAATGTATCTATCACAAGAGATGTTTCCGGTGAGGGCGTACAGC 57738 Query 189050 AAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTA 189109 ||||| | | |||||||| || |||||| | || || || |||||||| || || || | Sbjct 57737 AAGCTCTTCTTAAAATCATCGAGGGTACAATAGCAAATGTACCTCCTCAGGGAGGCCGCA 57678 Query 189110 AACACCCTCACCAAGAAATGCTTGAAATAGATACAACTAATATCTTGTTTATTCTTGGTG 189169 | || || || || || | | | || ||||| | ||||| |||| ||| ||| | Sbjct 57677 AGCATCCACAGCAGGAGACTATCGCTATTGATACTAAAAATATTCTGTTCATTTGTGGCG 57618 Query 189170 GAGCGTTTGATGGTCTTGAAAACATTAT 189197 | || ||||| ||||||||||| || || Sbjct 57617 GTGCCTTTGAAGGTCTTGAAAAGATAAT 57590 >seq4542 Length=128708 Score = 167 bits (184), Expect = 7e-36 Identities = 549/842 (65%), Gaps = 35/842 (4%) Strand=Plus/Plus Query 188756 aaaaaTCTAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAA 188815 ||||||| ||| || | | | || || || || || ||||| || |||| |||| Sbjct 40938 AAAAATCAAATATTTTAATGATAGGACCAACAGGCAGCGGAAAAACTTTGCTTGCCCAAA 40997 Query 188816 CATTGGCTGATATGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAG 188875 | ||||| | || ||| |||||||| | || || |||||||| |||||| ||||| | Sbjct 40998 CTTTGGCAAAAATTTTAAATGTACCTTTGGCGATTGTTGATGCAAATTCTTTGACAGAGG 41057 Query 188876 CTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATT 188935 | ||||| || ||||||||||| || | | || ||| || || ||| | || | Sbjct 41058 CAGGTTACGTCGGTGAAGATGTTGAGGATATTTTACTTGCGTTGATACAATCTGCAAACG 41117 Query 188936 ACGATATCGAATTA--GCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAAATTGC 188993 |||||| || | || ||||| || ||| | || || |||||||| || ||||| || Sbjct 41118 GCGATAT--TATCAAGGCAGAACGCGGGATTATTTACATTGATGAAGTTGACAAAATCGC 41175 Query 188994 TAGAAAATCAGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGC 189053 |||||| | | | ||| || ||| | || || ||||| || |||||||| Sbjct 41176 CAGAAAACCCG---------GCGTTAATCGTGATATTTCCGGAGAAGGCGTTCAGCAAGC 41226 Query 189054 TTTATTAAAAATCATTGAAGGTAC---AGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAA 189110 | |||||||| | |||||||| |||| || ||||| || | || | | Sbjct 41227 CCTGTTAAAAATTTTGGAAGGTACTCAAGTT---AATGTTCCCATTCCCAGCAGTATTCA 41283 Query 189111 ACACCCTCACCAAGAAATGCTTGAAATAGATACAACTAATATCTTGTTTATTCTTGGTGG 189170 || | || |||||| || ||| || || | ||||| ||||| ||| || || Sbjct 41284 TCAGCAAATGCAGGAAATGGTTACAATCGACACTAAAAATATTTTGTTCATTTGCGGCGG 41343 Query 189171 AGCGTTTGATGGTCTTGAAAACATTATCAAGAGACGCGCTACAAAA--TCAA-CTTTAGG 189227 |||||| | | | | || || |||| || | |||| |||||| | || | ||||| Sbjct 41344 CGCGTTTAACGATTTAGATAAAGTTAT--TGAAAAGCGC-ACAAAAGGTAAAGCGTTAGG 41400 Query 189228 TTTTGATGATAGTGTAGATA-AAGTACAAGAAGAAATCAAGGATGACAATAAAGTATTCC 189286 |||| | | | ||| | ||| |||||| || ||| ||| | || Sbjct 41401 ATTTG------GCGCAAATATTTCTTCAA-AAGAAAATAAAGATATTGGAAAACTTTTGA 41453 Query 189287 AACATCTTCAACCGCAAGATATTGTTA-AGTATGGTTTAATTCCAGAATTTATTGGGCGT 189345 | | || || | ||| || ||| | |||| |||||||| |||||| | || || Sbjct 41454 AGGAAGTTATGCCCGATGAT-TTATTACAAGATGGATTAATTCCGGAATTTGTAGGACGC 41512 Query 189346 GTACCAGTAATCGCAACTCTTAACAAACTTGATCGAGATGCATTGATTAACATTTTAACT 189405 | ||| |||| | || | | ||||| | || |||||||| | ||||| ||| Sbjct 41513 TTGCCAATAATTGTCACATTGGATCCGCTTGACGAAAATTCATTGATTCAAATTTTGACT 41572 Query 189406 GAGCCGCAAAACGCTATCATTAAACAATATCAGAAATTGTTAGATATGGATGGCGTGGAA 189465 ||||| |||| || | |||||||||| || ||| | | || |||||| || ||| Sbjct 41573 AAGCCGAAAAATGCACTGGTTAAACAATACCAAAAACTTATGGAAATGGATAACGCCGAA 41632 Query 189466 TTAGAATTCCAAAAAGAAGCATTAGAATCAATTGCAGATGAAGCGATTGAACGTAATACT 189525 |||| || || | || || | | |||| || | || || ||| | ||||| Sbjct 41633 TTAGTTTTTGAAGATGACGCGCTTAAGGCAATAGCGCACGAGGCAATTTTGAGAAATACC 41692 Query 189526 GGTGCTCGCGGATTACAATCCATTATTGAAAATATTATGTTAGATGTAATGTATGAAGTT 189585 || || ||||| || | || ||| |||||| |||||| | |||| |||| |||| || Sbjct 41693 GGAGCACGCGGCTTGCGTTCAATTCTTGAAAGAATTATGCGAAATGTTATGTTTGAAATT 41752 Query 189586 CC 189587 || Sbjct 41753 CC 41754 >seq2107 Length=14733 Score = 140 bits (154), Expect = 1e-27 Identities = 272/402 (68%), Gaps = 0/402 (0%) Strand=Plus/Plus Query 188794 GGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATGTACCTCTAGCTATCTCT 188853 ||||||||| | | ||||| || | ||| | || | | ||||| | || ||| || Sbjct 5563 GGTAAAACAATGCTCGCTCAGACTCTCGCTAAAATACTTAACGTACCCTTTGCAATCGCT 5622 Query 188854 GATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTT 188913 || || || || | || || || |||||||| || || || || || || || | || Sbjct 5623 GACGCGACGACTCTTACGGAGGCGGGTTATGTCGGCGAGGACGTTGAGAATATACTTCTC 5682 Query 188914 CGTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATC 188973 || ||||| || || ||||||| ||| | || || || | || || | || | Sbjct 5683 CGCTTAATTCAGGCTGCTGATTTCGACGTTGAGAAGGCAGAGCACGGTATAATTTACGTA 5742 Query 188974 GATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTATCT 189033 || ||| | || || ||| | |||||| |||| | || ||||| || || ||| Sbjct 5743 GACGAAATCGACAAGATTTCAAGAAAAAGCGAAAACCGTTCGATTACGCGCGACGTAAGC 5802 Query 189034 GGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCT 189093 ||||| || ||||| ||||| | | |||||| |||| ||||| ||| | || |||||| Sbjct 5803 GGCGAGGGCGTACAACAAGCGCTCCTTAAAATCCTTGAGGGTACTGTTTCTAACGTTCCT 5862 Query 189094 CCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAATAGATACAACTAATATC 189153 || ||| || ||||| || ||||| || || | || | ||||||||||| ||||| Sbjct 5863 CCAGGAGGAGGACGTAAGCATCCTCAGCAGGAGTTTATTCAGATAGATACAACCAATATT 5922 Query 189154 TTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAAACATT 189195 | || || || || || || || || ||||||| ||| Sbjct 5923 CTTTTCATCTGCGGCGGTGCTTTCGACGGAATTGAAAAGATT 5964 >seq1577 Length=94726 Score = 131 bits (144), Expect = 5e-25 Identities = 325/491 (66%), Gaps = 3/491 (1%) Strand=Plus/Plus Query 188642 ATATTATTGGACAAGAAAAAGCAAAACGTCAATTAGCTGTATCAGTTTATAATCATTATA 188701 || |||||||||| ||| |||||||| | ||||| | || || ||||| |||| Sbjct 58864 ATGTTATTGGACAGGAAGAAGCAAAAAAGGTTCTCGCTGTCGCTGTGTACAATCACTATA 58923 Query 188702 AGCGCATTAATGCTCTTAATGaaaaatcaaaaaatgatgatggagtaaagatcaaaaaaT 188761 | || || || | |||||| ||| ||| ||| || |||| | |||| Sbjct 58924 AACGTCTTC--GC-CACGCTGAAAAGACAAGTGGTGAAAATGATGTTGAGATAGAGAAAT 58980 Query 188762 CTAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGG 188821 | ||| | | | ||||| || || | |||||||| || | || | ||| | | Sbjct 58981 CGAATATAATACTCGTTGGGGAAACCGGAACTGGTAAAACGTTGATAGCACGAACTATAG 59040 Query 188822 CTGATATGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTT 188881 || | ||| | |||| || | ||| | |||||||| | || || || ||||||| Sbjct 59041 CTAAAATGCTCGATGTGCCATTCTGTATAGCCGATGCAACAACGTTGACTGAGGCTGGTT 59100 Query 188882 ATGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATTACGATA 188941 ||||||| || ||||| ||||| || ||| | | ||| | || || || ||||||||| Sbjct 59101 ATGTAGGAGATGATGTCGAAAATGTGTTGGTGAGATTATTACAGGCTGCCGATTACGATG 59160 Query 188942 TCGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAAT 189001 || | ||| ||| |||||||| | ||| || ||| | || |||||||| | || Sbjct 59161 TCACAGCAGCCGAAAAAGGAATTGTTTTTATTGACGAAATCGACAAAATTGCCCGGAAGA 59220 Query 189002 CAGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAA 189061 || | | || ||||| || ||||| ||||| || ||||| || || || || | | Sbjct 59221 GCGACAATCCTTCAATTACACGCGATGTCTCTGGAGAGGGAGTCCAACAGGCATTGCTGA 59280 Query 189062 AAATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACC 189121 | | | |||||| | || | || || || || ||||| ||||| || || || | | Sbjct 59281 AGCTTTTGGAAGGTGCGGTGGTAAATGTCCCGCCACAAGGCGGTCGCAAGCATCCCGAAC 59340 Query 189122 AAGAAATGCTT 189132 || | ||| || Sbjct 59341 AACAGATGATT 59351 >seq3990 Length=155859 Score = 120 bits (132), Expect = 1e-21 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 309226 CCAAAAGGTCGTATTATTGAGTTTTTTGGGGCAGAATCTTCAGGTAAAACACTTTGCGCT 309285 |||||||||||||| ||||| ||| ||| | || || |||||||||||| | | | Sbjct 85898 CCAAAAGGTCGTATCATTGAAATTTATGGTCCTGAGTCATCAGGTAAAACAACTCTCACC 85839 Query 309286 ACACGAGCAATGGCTCAAGTGCAACAACAAGGTGGTATTTGTGCTTTAATAGATATGGAA 309345 | | ||||| ||| || || |||||||||||||||| ||||| || ||| ||| Sbjct 85838 ATTCATGCAATAGCTGAATGTCAGAAACAAGGTGGTATTTGCGCTTTCATCGATGCAGAA 85779 Query 309346 CATGCATTCGATCCTAGTTTTGCCGCAAAATTAGGT-TTAAACTCTGATGATTTATTCTT 309404 ||||| ||||| | || ||||| |||||||||| | |||||| ||||| || | | | Sbjct 85778 CATGCTTTCGACAGTTTTTATGCCGAAAAATTAGGTGTAAAACTC-GATGAATTGTACGT 85720 Query 309405 ATCACAACCAGAT 309417 || ||||||||| Sbjct 85719 TTCTCAACCAGAT 85707 >seq2727 Length=5451 Score = 98.7 bits (108), Expect = 3e-15 Identities = 181/259 (70%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 472377 ATAATAAAATAAAAGATTATATGCATAAGAGTTCTAGATATATAATTAATTATTGCTTAT 472436 |||| ||||| || |||||| | ||||| | |||| ||| |||| ||| | | | Sbjct 264 ATAACAAAATTAATGATTATTTTCATAAAATATCTACGTATTTAATCAATCAAGCAGTTT 205 Query 472437 CTAATAAGATAAAAACAATAGTGATTGGATATAATCAAAATTGGAAAGAA-AGACTTATT 472495 | || || | | | ||| | || |||| ||| || | |||||| || ||| ||| Sbjct 204 CCAACGGTATTACAGCTATATTTATAGGATTGAATAAAGAATGGAAACAAGAGA-TTAAA 146 Query 472496 GTCTCAAAACAACAAAATCAAAATTTCTTTCAAATTCCTTATT-TAACTTTAATTGAAAT 472554 | ||| || | |||||||| || |||| || |||| | | |||| |||| || Sbjct 145 CTTGGAAAGGAAAATAATCAAAAATTTGTTCAGATACCTTTTGATGACTT-AATTAGTAT 87 Query 472555 GATACAATATAAAGCTGAAGAATATGATATAGATGTTATACTAACTGAAGAATCTTATAC 472614 |||| ||||||||| |||| | | |||||||||||| |||||||||||| ||||| Sbjct 86 GATAACTTATAAAGCTAAAGATAAAGGCATAGATGTTATAACAACTGAAGAATCCTATAC 27 Query 472615 TTCCAAA-GCTAGTTTTTT 472632 || ||| ||| ||||||| Sbjct 26 ATCAAAATGCTCGTTTTTT 8 >seq4580 Length=24552 Score = 91.5 bits (100), Expect = 5e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 46578 ACAATTTTGTTTTTAGACGAAATACATCGTTTCAATAAAGGACAGCAAGATTCGTTATTA 46637 |||||||| ||| | |||||||| || || || |||||| | || ||||||| | ||| Sbjct 24132 ACAATTTTATTTATTGACGAAATTCACCGCTTTAATAAAAGTCAACAAGATTTTCTGTTA 24073 Query 46638 CCTTATGTTGAAGATGGAACAATTACGTTAATTGGTGCAACAACTGAAAATCCATTTTTT 46697 || || ||||| || || | | | | ||||| || ||||| ||||||||||| || ||| Sbjct 24072 CCGTACGTTGAGGACGGCAGATTAATTTTAATCGGCGCAACTACTGAAAATCCTTTCTTT 24013 Query 46698 GAA 46700 ||| Sbjct 24012 GAA 24010 >seq1600 Length=31058 Score = 87.8 bits (96), Expect = 6e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 411232 ATGGTGGTTGTAGCTCAATTGGTTAGAGCGCTAGATTGTGGATCTAGAGGTTGTGGGTTC 411291 ||||||| |||| ||| |||||||||||| ||||||||||||| ||||| |||||||| Sbjct 24650 ATGGTGGGCGTAGTTCAGCTGGTTAGAGCGCCAGATTGTGGATCTGGAGGTCGTGGGTTC 24709 Query 411292 GATCCCCATCATCCACCC 411309 || ||||| | |||||| Sbjct 24710 GAGCCCCACCTCCCACCC 24727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591806399001152