Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_023735.1 Length=76797 Score E Sequences producing significant alignments: (Bits) Value seq1602 419 1e-112 >seq1602 Length=30070 Score = 419 bits (464), Expect = 1e-112 Identities = 1130/1717 (66%), Gaps = 31/1717 (2%) Strand=Plus/Minus Query 12302 TCGAACACCGCAGTTCCGATTTACTACGGAAAGTTCCGTGAAGCGGTGCTCAATGGTGAG 12361 || || ||||||||||| ||| || || | || ||||| || || | | || ||| Sbjct 22071 TCTAATACCGCAGTTCCATATTATTATGGGCAATTTCGTGATGCTGTATTAAGAGGCGAG 22012 Query 12362 ATTCCGGTAAACCGAGAAATCTCCATGGAGATGAATCGCATCGACGACCTCATCGCAAAT 12421 ||||| || | ||| || || ||||| ||||| | || || || || | | || Sbjct 22011 ATTCCAGTTTGCGAAGAGATATCTATGGAAATGAACAGAATAGATTCTCTAATAGAAGAT 21952 Query 12422 GACAACATCTATTACGATGACCAGGCTGTCGAGGGATTCATTCGCTATTGTGAAAACGAG 12481 |||| ||||||||||| | || | | |||| ||| |||||| ||||| ||| Sbjct 21951 CCTGACATTTATTACGATGAAGATGCAATTAAAGGATGGATTGCCTATTGCGAAAATGAG 21892 Query 12482 ATGACTCTGACCGATGGTTCAGATCTTCATCTCTTGGATTCGTTCAAACTTTGGGCCGAA 12541 ||||| || || ||||| || ||| | ||||| || ||| || ||||| ||||| ||| Sbjct 21891 ATGACGCTAACTGATGGCTCTGATTTACATCTTTTAGATAGCTTTAAACTGTGGGCAGAA 21832 Query 12542 CAAATCTTCGGATGGTACTACTTCGTCGAACGAAGTGTCTACGAACCTTTCGAAGACAAT 12601 ||||| | ||||||||| || |||| |||||| || || ||||| || ||| Sbjct 21831 CAAATATACGGATGGTATTATTTCGATGAACGATCCGTGTATGAACCAGGACCCGATAAT 21772 Query 12602 CACGGTGGGCGGTACGTCAACAAGGTTGTGAAGAAACG---ACTGATCACTAAGCAGTAT 12658 || || |||| || |||| || | | ||||| || | || ||| |||||| Sbjct 21771 CATGGCGGGCATTATGTCACTAAAATGATCAAGAAGCGTTTAGTGCGAACT---CAGTAT 21715 Query 12659 CTGATCGTCGCCCGAGGCGCAGCCAAGTCGCTCTATGAGTCTCTTCTCCAGAGCTACTTC 12718 | || || || |||||||| || ||||| | ||||| | | | || || Sbjct 21714 TTAATAGTAGCACGAGGCGCTGCTAAGTCTATGTATGAAAGTTGTATACAATCATATCAT 21655 Query 12719 CTCAATGTCGACACACAGACCACCCATCAGATCACGACCTCGCCGACCATGAAGCAGTCC 12778 || ||||| || || ||||| | || |||| || | || || ||| ||| | Sbjct 21654 CTTAATGTAGATACCTCAACCACATACCAAGTCACAACAGCACCAACGATGCTGCAAGCA 21595 Query 12779 GAGGAAGTGATGGCCCCGTTCCGAACCGCGATCACTCGTGCAAGAGGACCGCTGTTCGAA 12838 || ||||| ||| | || ||||||| ||||| |||||||| ||||| ||| |||| | Sbjct 21594 GACGAAGTTATGTCTCCAATCCGAACAGCGATTACTCGTGCCAGAGGTCCGTTGTTTCAG 21535 Query 12839 TTCCTTACCGAGGGTTCTATGCAGAACACCACGGGTA--ATAGGTTTGCTAGGCAAAAGT 12896 | | || || ||||| | || || || || |||| | || | | || ||| | Sbjct 21534 ATGTTAACTGAAGGTTCACTTCAAAATACGACCGGTAGCAAAGCTAATCGAGTTAAA--T 21477 Query 12897 TGGCTTCCACCAAGAAGGGTATCGAGAACTTCTTGACGGGCTCCATGCTAGAAGTTCGCC 12956 | ||| || ||||||||||||||||| ||||| || || || ||| | | ||| | | Sbjct 21476 TAGCTAGTACAAAGAAGGGTATCGAGAATTTCTTAACAGGATCAATGATTGCAGTAAGGC 21417 Query 12957 CGATGTCCATCAACAAGCTGCAGGGTCTTCGACCCAAGGTCTCGACGGTGGACGAATGGT 13016 | ||| | | ||||||| || || | ||| |||||| | || || || |||||| Sbjct 21416 CAATGACAGTTGACAAGCTTCAAGGATTACGATGCAAGGTAGCTACTGTCGATGAATGGC 21357 Query 13017 TGTCCGGCGACATCCGAGAGGACGTCATCGGCGCCATCGAACAGGGCGCGTCCAAGCTTG 13076 | || ||||| || ||||| || || || || || | || || || ||| | || || Sbjct 21356 TTTCTGGCGATATTCGAGAAGATGTAATTGGAGCTTTAGAGCAAGGTGCGGCTAAAGGTG 21297 Query 13077 ------ACGACTACTTGATCGTTGCCGTCAGCTCGGAGGGAACTGTTCGAAACGGGTCGG 13130 | ||||| || || | ||| || || || || || || ||||| || | | Sbjct 21296 GAATGGATGACTATTTAATAATAGCCACTAGTTCTGAAGGTACAGTACGAAATGGCCCTG 21237 Query 13131 GCGACACTATCAAAATGGAACTTGCAGACATCCTCAAGGGGGAGTACTCTGCGCCGCACG 13190 | || | |||||||||| ||| || || || || || || || ||||||| Sbjct 21236 GAGATAGTATCAAAATGATGCTTATGGATATTCTTAAAGGTGAATATATCAATCCGCACG 21177 Query 13191 TCTCCATCTGGCATTACAAGTTGGACAATCTCGAAGAGGTTGGTCGACCTGAGATGTGGT 13250 || || ||| || ||| | || || | || || || | | ||| || |||||| Sbjct 21176 TCAGTATTTGGTGGTATAAGCTAGATAAATTAGATGAAGTGGCGCAACCAGATATGTGGC 21117 Query 13251 TGAAGGCGAACCCCAACCTCGGTAAGACCGTAACTTACGAAACTTACCAGTTGGATGTAG 13310 | || || || || || |||||||||| ||| | ||||| || ||||| |||||||||| Sbjct 21116 TTAAAGCCAATCCAAATATCGGTAAGACTGTATCATACGAGACATACCAATTGGATGTAG 21057 Query 13311 AACGAGCTGAGAAAGCGCCTGCATCTCGAAACGATATCTTGGCTAAGCGATTCGGAATCC 13370 || |||| || ||||| ||||| |||||| |||||||| ||||| || || || || | Sbjct 21056 AAAGAGCAGAAAAAGCACCTGCTAATCGAAATGATATCTTAGCTAAACGCTTTGGTATAC 20997 Query 13371 CTATGGAGGGGTACACCTACTTCTTCACTTATGAAGAGACGATTCCTCATCGTCGTCAAA 13430 ||||||| || || ||||||| ||||| |||||||| || | ||| ||||| ||| Sbjct 20996 CTATGGAAGGTTATACCTACTATTTCACGTATGAAGAAAC-ACTCC-CATCG-CGTAGGC 20940 Query 13431 GCTTCTGGCGTCA------GCCTTGTGCTCTCGGCGCTGACCTTTCGCAGGGCGATGATT 13484 |||| | | | || ||| | | || || || | || || || ||||| | Sbjct 20939 GCTTAAGTTTTAATGGATTACCATGTTCCATTGGAGCCGATTTATCACAAGGTGATGACT 20880 Query 13485 TCTGTGCGTTCACGTTCTTCTTCCCTCTTCGAAACGGGAAGTTCGGAATCAAGACTCGCA 13544 | | || | || || ||| | ||| || || || || || ||||| || | Sbjct 20879 TTACATCTTTTTGTTGTTTATTTCCTATGCGAGGCGACAAATTTGGCATTAAGACGCGAA 20820 Query 13545 GCTACATCACCGAACTAACGTTGATGAAGTTGCCTGGCGCACTCCGACACAAGTACGACG 13604 |||||||||||| ||| |||| || ||||| || | ||| || ||||| | Sbjct 20819 ATTACATCACCGAAAACACGATGATTAAATTGCCAATGGCTATGCGAAGTAAATACGAGG 20760 Query 13605 AATTCGTTGCCGAAGGCAGCTTGCACGTAATGCCCGGCACCATCTTGGAGATGATGGACG 13664 |||| | |||||| || | || ||||| || ||||| | | |||||||| | Sbjct 20759 AATTTACTAACGAAGGTAGTCTTATTGTTATGCCAGGTACCATTCTTAACATGATGGATG 20700 Query 13665 TCTACGACGATCTGGATAATCACAT-CCAAGACTGCGAGTACGACGTTCGAGCTTTCGGA 13723 | ||||| ||| | || | || | | || || ||||||||| || | || ||| Sbjct 20699 TATACGATGATTTAGACGAGTGGATAGCTAAAC-ATGATTACGACGTTAGATCATTTGGA 20641 Query 13724 TTCGACCCGTACAACGCTAAAGAGTTCGTTGCTCGCTGGGAAGCTGAGA--ACGGACCGT 13781 | || ||||| || ||| |||||||| | || ||| || ||| | || |||| Sbjct 20640 TATGATCCGTATAATGCTCAAGAGTTCTCAGAGCGTTGG--TGCAAAGAATATGGCCCGT 20583 Query 13782 TTGGTATCGAGAAGGTCATTCAGGGTTCCAAGACCGAATCGGTTCCTCTGGGTGAGCTCA 13841 ||| | || || || ||||| ||| | || || ||||| |||||||| || || | | Sbjct 20582 ATGGGGTAGAAAAAGTAATTCAAGGTGCTAAAACGGAATCCGTTCCTCTAGGCGAATTAA 20523 Query 13842 AAATTCTAAGTGAAGAGCGTTGTCTGATCTTCGACGAAAGCCTGATGTCGTTCACGATGG 13901 | | | |||||| | | | || || ||| | ||| || | |||| Sbjct 20522 AGAAATTGGCTGAAGATGGACTATTACTGTTTGATGAATTTATTATGCAATTTGCAATGG 20463 Query 13902 GTAACGCCATCACTCTGGAAGACACGAATGGTAACCGCAAGCTTCTCAAGAAGCGACAGG 13961 | || ||| || | ||||| || ||||||||||| || | || |||| | | Sbjct 20462 GCAATTGCATAACAATCGAAGATACTAATGGTAACCGGAAATTATATAAACGGCGATATG 20403 Query 13962 AAGAGAAGATCGATAACGTCGCAGCCATGATGGATGC 13998 ||| ||||| ||| || ||||| ||||||||||| Sbjct 20402 AAGCAAAGATTGATCCGGTTGCAGCAATGATGGATGC 20366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 245610335827362