Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20]
5,099 sequences; 74,234,735 total letters
Query= NC_024205.1
Length=159837
Score E
Sequences producing significant alignments: (Bits) Value
seq4630 96.9 4e-15
>seq4630
Length=6049
Score = 96.9 bits (106), Expect = 4e-15
Identities = 247/376 (66%), Gaps = 0/376 (0%)
Strand=Plus/Minus
Query 7014 GCTTTAAAATTGTATAAAGGTTTGATAATATCTTTGATATCGATTGTATCTTTCGTGTTC 7073
|||||||||||||| | ||||| ||||| || | || || | || || |
Sbjct 4200 GCTTTAAAATTGTAAACCGGTTTCATAATTTCAATAATTTCTACAGTTTCGCCAATAACG 4141
Query 7074 TCGATAATTTCATCCATAGGTTTGTACACCATAGGGGCTTCATCCAATGTGCTCTCAACA 7133
|| ||||| ||||| | | |||||| | || | |||||| | || | |||
Sbjct 4140 TCAATAATATCATCAAGCGTTTTGTAGGCTTGCGGCGATTCATCAAGCGTATTTTCATTT 4081
Query 7134 ACAGAAGTTGTCCAAACGCCAGCCATTGTATTTGTAAATTCTTCGATGTCTAGTGAATCC 7193
|| |||||||| ||| || ||||||| ||| ||| ||||| | | ||||||
Sbjct 4080 ACCGAAGTTGTATAAATCCCCGCCATTGAGTTTTGAAAATCTTCAAGCGAAATTGAATCT 4021
Query 7194 TTAGCCTTTCTGCGACTCATAATACGTCCTGCTCCATGAGGTGCTGAGAAGTTCCAATCA 7253
|| || | | ||| ||| ||||| ||||| || || || || || | ||||| |||
Sbjct 4020 TTGGCAGTGCCGCGTGACATTATACGCCCTGCGCCGTGCGGAGCCGAATAATTCCATTCA 3961
Query 7254 GGATTACCTTTACCAAACGCAATGATAGAACCATCTCGCATGTTGATAGGGATAATCACT 7313
| ||| |||||||| | ||| | | || || || ||||| || || || || | |||
Sbjct 3960 GCATTTCCTTTACCTACCGCCAAAACCGAGCCGTCACGCATATTTATTGGAATTAAAACT 3901
Query 7314 CGCTCTCCTTGTTGAGCTGAGATAGCACCTTTACGCATAATCATGTTGTCCATATCGATA 7373
|| || || || | ||||| || || |||| |||||| | || | || ||
Sbjct 3900 TTTTCGCCCGCGTGCGCCGCAATAGCTCCCTTGCGCAGAATCATTTCTTCAACGTCAATG 3841
Query 7374 TAGTTATGGATAGTAT 7389
|| || ||||| ||||
Sbjct 3840 TAATTGTGGATTGTAT 3825
Score = 91.5 bits (100), Expect = 2e-13
Identities = 91/118 (77%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 7964 CATCCCGCATCCGATATCGACTCCTACTAGATTTGAAACGATTTTATCTTGAATTGTCAT 8023
||| ||||| || ||||| || ||||| | ||||| ||| |||||||||||| |||||
Sbjct 3232 CATTCCGCAGCCAATATCTACGCCTACAACATTTGGTACGGCTTTATCTTGAATCGTCAT 3173
Query 8024 TGTTGTACCTATTGTACATCCTGCACCTGCATGCGTGTCAGGCATAATACGAATCTTA 8081
||||||||| ||||| || || | || || || ||||||||| || | ||| |||
Sbjct 3172 TGTTGTACCGATTGTGCAACCCGTGCCCGCGTGTACGTCAGGCATTATCCTAATTTTA 3115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511317807803880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |