Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_024355.1 Length=93794 Score E Sequences producing significant alignments: (Bits) Value seq4604 84.2 1e-11 >seq4604 Length=10658 Score = 84.2 bits (92), Expect = 1e-11 Identities = 147/207 (71%), Gaps = 19/207 (9%) Strand=Plus/Minus Query 11680 AATACCGAGATAACCATAATAAATAAAAATGTTATGGT--ATTGTAACGCATAGGAATTG 11737 ||||||| ||||| ||||| | |||| ||| | | ||||||||||||||| || Sbjct 8145 AATACCGTGATAAGTC-AATAATTTAAAA-GTTGTTGACCATTGTAACGCATAGGCGATG 8088 Query 11738 AACCTATGCTTTTTTATTAGCATAGAATATAATATTCCCACGAGGGTCCGACA------- 11790 ||||| |||||||||||| ||| |||||||||| ||||||| ||||| || Sbjct 8087 AACCTGTGCTTTTTTATT-GCACAGAATATAATTCGTCCACGAGTGTCCGGCACCTGACC 8029 Query 11791 -GTAAT----ATACTGAAAATGTATGCTGAACTATATGGCGACATAT-AGAAGTGATTGA 11844 |||| | ||||||| ||||||||||| ||| | | ||| |||||| || Sbjct 8028 AGTAAGGCTGAAGGTGAAAATATATGCTGAACT-TATAGGAAACTATAAGAAGTATGGGA 7970 Query 11845 TAAAAAACTATCACGATAACAAAATGA 11871 |||||| | ||| ||||||| ||| Sbjct 7969 TAAAAAGCCTGTACGGTAACAAACTGA 7943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299997355786945