Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq2619 102 5e-17 seq1923 91.5 9e-14 >seq2619 Length=11042 Score = 102 bits (112), Expect = 5e-17 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 20045 AAATTATCTTGCCAGTTGTATCAACGAAGTGCTGACTTATTACTTGGTGTTCCATTTAAT 20104 ||||||||||||||||||||||| ||||| ||| | || ||||||||||| || ||| Sbjct 2471 AAATTATCTTGCCAGTTGTATCAGCGAAGCTGTGATGTCTTTCTTGGTGTTCCTTTCAAT 2412 Query 20105 ATTGCATCTTATGCTTTACTTACACACTTAGTTGCATTAGAATGTGGGCTTAATGTTGGT 20164 ||||| ||||||| | ||||| || | | || | || | ||| |||||||| Sbjct 2411 ATTGCTAGTTATGCTCTTCTTACTCATATGATGGCGCAGCAGTGCGATCTTGATGTTGGT 2352 Query 20165 GAGTTTGTTTGGGTTGGTGGTGATTGCCACATTTACTCAAATCA 20208 || ||||||||| || || ||| ||| | || |||||||| Sbjct 2351 GATTTTGTTTGGACCGGCGGAGATGTTCACTTATATTCAAATCA 2308 >seq1923 Length=163503 Score = 91.5 bits (100), Expect = 9e-14 Identities = 126/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 19950 GAAGATTAATTGTATCAGGTTGGAATCCTCATGATGTTGCAGATGTAGATTTACCACCTT 20009 ||||| | ||||| || | ||||||| | |||| ||| || | || | ||||| | Sbjct 156646 GAAGAATGATTGTGTCTGCTTGGAATGTTGCTGATATTGATAATATGAATCTCCCACCAT 156587 Query 20010 GCCATACACTATTTCAATTCTTTGTGAAAGATGGTAAATT-ATCTTGCCAGTTGTATCAA 20068 |||| | || |||||||||| |||| | | || || || | | | | || | ||||| Sbjct 156586 GCCACATCCTTTTTCAATTCTATGTGGCAAACGGCAAGTTGAGCCTTC-AGCTCTATCAG 156528 Query 20069 CGAAGTGCTGACTTATTACTTGGTGTTCCATTTAATATTGCATCTTATGCTTTA 20122 ||||||| || || ||||| ||||| ||||||||||| |||||||||||| Sbjct 156527 AGAAGTGCAGATACGTTTCTTGGCGTTCCTTTTAATATTGCTTCTTATGCTTTA 156474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318991375348049