Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_025830.1 Length=120938 Score E Sequences producing significant alignments: (Bits) Value seq2701 91.5 1e-13 seq2445 87.8 1e-12 >seq2701 Length=6067 Score = 91.5 bits (100), Expect = 1e-13 Identities = 127/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 109109 GGTCAACATCTGAACGTTAACGTTCTGCGTCGGGAAACTCTGGAAGATGCAGTTAAGCAT 109168 ||||| |||||||| || |||||||| | ||||| ||| |||||| | | || Sbjct 5190 GGTCAGCATCTGAATGTGAACGTTCTCAACAGAGAAACACTGCTCGATGCAATGGAACAC 5249 Query 109169 CCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACTCT 109228 || ||||||||||| ||||| |||||||| || |||||||| || || || |||||| Sbjct 5250 CCTGAAAAATATCCTACACTGACAATCCGTGTTTCAGGTTATGCTGTACGTTTCAACTCT 5309 Query 109229 CTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGAGAGTCTATAAT 109286 | || |||||||||| || ||| | | | || || ||| ||| || |||| Sbjct 5310 TTAACCAAAGAACAGCAGCAGGATGTTGTAACAAGAACTTTCACTCAGAAGCTGTAAT 5367 >seq2445 Length=42024 Score = 87.8 bits (96), Expect = 1e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 9582 TTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCACCTGCTCTAA 9641 ||| |||||||| || ||| ||||||| |||||| | ||||||||||| ||||||||| Sbjct 34167 TTTTGTGGCCCCAGCAGGATTTGAACCTGCGACCCACGGATTATGAGTCCGCTGCTCTAA 34108 Query 9642 CCACTGAGCTAAGGGGCCGTA 9662 || |||||||| |||||| || Sbjct 34107 CCGCTGAGCTATGGGGCCTTA 34087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 386852757903961