Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_026610.2 Length=56637 Score E Sequences producing significant alignments: (Bits) Value seq4656 91.5 5e-14 seq828 89.7 2e-13 seq2374 84.2 8e-12 >seq4656 Length=58406 Score = 91.5 bits (100), Expect = 5e-14 Identities = 101/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 20606 TGCGAACACCATATCGCACCGATCATTGGTCTG-GCCACAGTAGCCTACATCCCGAACGG 20664 |||||||||||||| || |||| || | ||||| |||||||| ||||| ||||| Sbjct 55519 TGCGAACACCATATGATGCCCTTCATCGGCAAGTGCCAC-GTAGCCTATATCCCCAACGG 55461 Query 20665 GAAGATCGTCGGCCTGTCCAAGATCACGCGCTTGGTCGATGCCTTCGCCCGCCGCCTACA 20724 || ||| ||||||| ||| ||| | ||| | ||||| ||| |||||||||||| || Sbjct 55460 CAAAATCACCGGCCTGAGCAAAATCGCCCGCGTAGTCGAGACCTACGCCCGCCGCCTCCA 55401 Query 20725 AGTGCAGGAGCG 20736 || |||||||| Sbjct 55400 GGTCCAGGAGCG 55389 >seq828 Length=6688 Score = 89.7 bits (98), Expect = 2e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 20570 ATGGTGGTGGTCAAGGATATTCCATTCTTCTCCCATTGCGAACACCATATCGCACCGATC 20629 ||||||||||| ||||| || | |||||| ||||| || ||||| ||| || Sbjct 6397 ATGGTGGTGGTGAAGGACATAGAGCTTTTCTCCATGTGCGAGCATCATATGATGCCGTTC 6338 Query 20630 ATTGGTCTGGCCACAGTAGCCTACATCCCGAACGGGAAGATCGTCGGCCTGTCCAAGATC 20689 || || |||| || || ||||| || |||| ||| ||| || |||||||| Sbjct 6337 ATCGGCAAGGCCCACGTGGCATACATTCCCGACGGCCGGATAACCGGTCTTTCCAAGATT 6278 Query 20690 ACGCGCTTGGTCGATGCCTTCGCCCGCCGCCTACAAGTGCAGGAGCGTTTGACCGATCAG 20749 | || ||||||| ||| |||||||| || || |||||||||||| | ||||| ||| Sbjct 6277 GCCCGTGTGGTCGAGACCTATGCCCGCCGTCTCCAGGTGCAGGAGCGTCTTACCGAGCAG 6218 Query 20750 AT 20751 || Sbjct 6217 AT 6216 >seq2374 Length=10174 Score = 84.2 bits (92), Expect = 8e-12 Identities = 134/188 (71%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 20568 AGATGGTGGTGGTCAAGGATATT--CCATTCTTCTCCCATTGCGAACACCATATCGCACC 20625 ||||||| |||| ||||| || || | |||| || ||||| ||||| || || Sbjct 9426 AGATGGTACTGGTGAAGGACATCGACCTCTATTCTACC--TGCGAGCACCACATGCTGCC 9369 Query 20626 GATCATTGGTCTG-GCCACAGTAGCCTACATCCCGAACGGGAAGATCGTCGGCCTGTCCA 20684 |||| || | ||||| || || |||||||||||||| | ||| ||||||| || Sbjct 9368 TTTCATCGGCAAGTGCCAC-GTGGCGTACATCCCGAACGGCAGGATTACCGGCCTGAGCA 9310 Query 20685 AGATCACGCGCTTGGTCGATGCCTTCGCCCGCCGCCTACAAGTGCAGGAGCGTTTGACCG 20744 | ||| | ||| |||| || ||| |||| | | || || ||||||||||| | |||| Sbjct 9309 AAATCGCACGCGTGGTTGAGACCTACGCCAGGAGGCTGCAGGTGCAGGAGCGGCTCACCG 9250 Query 20745 ATCAGATT 20752 | |||||| Sbjct 9249 AGCAGATT 9242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181105833264562