Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_027204.1 Length=194701 Score E Sequences producing significant alignments: (Bits) Value seq2451 89.7 6e-13 seq758 84.2 3e-11 >seq2451 Length=31860 Score = 89.7 bits (98), Expect = 6e-13 Identities = 182/266 (68%), Gaps = 6/266 (2%) Strand=Plus/Plus Query 176399 CACCTGATCGAAGTGATTGTTATAGATGTGGGTATCACCAAG-GT-TGC-CGATCAGTTC 176455 ||||||||||||||| || | || | ||| ||||| || || ||| ||| | || Sbjct 18259 CACCTGATCGAAGTGGTTCCTGTACAGGTGCGTATCTCCCGTCGTGTGCACGAAC---TC 18315 Query 176456 CCCGACTTCCAAGCCGCATTCCAGCGCGATCAGATGTGTCAGGAGTGCGTAAGAGGCGAT 176515 ||| | || |||| || | || |||| | || || || ||||| ||||| || Sbjct 18316 TCCGGGCTGCAGGCCGGTGACCTGGGCCATCATGAGCGTAAGCAGCGCGTAGGAGGCTAT 18375 Query 176516 GTTGAATGGAAGCCCCAAGAAGACGTCCACGGACCGCTGATTCCAAAGGCAGGACAGTTT 176575 |||||| |||| |||| ||| ||||| || ||||||| | ||||||||||||| Sbjct 18376 GTTGAAGGGAACGCCCAGGAACACGTCGGCGCTGCGCTGATACAGCTGGCAGGACAGTTT 18435 Query 176576 CCCGTTGCGGACATAGAACTGGAAACCGTAGTGACACGGCGGCAAAGCCATTAGATCGAC 176635 ||| | || ||||||||||| | |||| || || |||| ||||| | || || Sbjct 18436 TCCGCCGGCCACGTAGAACTGGAACAGGCAGTGGCAGGGGGGCAGGGCCATCTGGTCCAC 18495 Query 176636 CGCCCCGACATTCCAAGCCGAGACCA 176661 | | | ||||| |||| ||||| Sbjct 18496 CTCGGCCGGGTTCCAGGCCGTGACCA 18521 >seq758 Length=33601 Score = 84.2 bits (92), Expect = 3e-11 Identities = 177/258 (69%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 176399 CACCTGATCGAAGTGATTGTTATAGATGTGGGTATCACCAAGGTTGCC-GATC-AGTTCC 176456 |||||| || || ||||| | || ||||| || || || ||||| || | | ||| Sbjct 8503 CACCTGCTCAAAATGATTCCTGTAAATGTGCGTGTCTCC--GGTTGTGTGAACGAATTCA 8560 Query 176457 CCGACTTCCAAGCCGCATTCCAGCGCGATCAG-ATGTGTCAGGAGTGCGTAAGAGGCGAT 176515 || || | |||||| |||| |||| ||| || || || ||||| || ||||| Sbjct 8561 CCAGGCTCGAGGCCGCAGGTTTGCGCTATCATCATG-GTGAGAAGCGCGTAGGACGCGAT 8619 Query 176516 GTTGAATGGAAGCCCCAAGAAGACGTCCACGGACCGCTGATTCCAAAGGCAGGACAGTTT 176575 ||||| |||| |||| ||| ||||| || ||||| | ||||||| ||||| Sbjct 8620 ATTGAACGGAACACCCAGGAACACGTCTGCGCTGCGCTGGTAGAGCTGGCAGGAGAGTTT 8679 Query 176576 CCCGTTGCGGACATAGAACTGGAAACCGTAGTGACACGGCGGCAAAGCCATTAGATCGAC 176635 |||||| ||||||||||||||| |||| || || |||| |||||| || || Sbjct 8680 CCCGTTTGCCACATAGAACTGGAAAAGACAGTGGCAGGGAGGCAGCGCCATTTTGTCCAC 8739 Query 176636 CGCCCCGACATTCCAAGC 176653 | | || |||||| || Sbjct 8740 CTCTCCTGGATTCCACGC 8757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622875496942440