Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_027331.1 Length=170341 Score E Sequences producing significant alignments: (Bits) Value seq1931 86.0 7e-12 seq4575 82.4 8e-11 >seq1931 Length=77865 Score = 86.0 bits (94), Expect = 7e-12 Identities = 108/145 (74%), Gaps = 4/145 (3%) Strand=Plus/Plus Query 71206 TTGACGGAATCGAACCGCCGACCTTCTCATTACAAGTGAGTTGCTCT--ACCTACTAAGC 71263 |||||||| |||||||||||||| ||| || ||| || |||||| ||| || ||| Sbjct 16393 TTGACGGATTCGAACCGCCGACCCTCTGCTTGTAAGGCAGATGCTCTGAACCAGCTGAGC 16452 Query 71264 TAAATCAGCA-AATTGGTCTCCACAGAATGACTCGAACATTCGACCTCCTGGTCCCAAAC 71322 |||| | || ||| ||| ||||||||||| ||||| ||||||||||||| Sbjct 16453 TAAACGCCCTTAAAAAGTCGGGGCAGCGTGACTCGAACACGCGACCGCCTGGTCCCAAAC 16512 Query 71323 CAGGCGCTCTACCAAGCTGAGCTAT 71347 |||| | ||||||| ||| ||||| Sbjct 16513 CAGGAACGCTACCAA-CTGCGCTAT 16536 >seq4575 Length=28649 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 71081 TTGGTGACCCCATCTGGACTTGAACCAGAAACCTACCAGTTATGAGCCGGTTGCTCTAAC 71140 |||||| |||| ||||||||||| ||| ||| |||||||||||||||||||||| Sbjct 5884 TTGGTGGACCCACTAGGACTTGAACCTAGGACCGACCGGTTATGAGCCGGTTGCTCTAAC 5943 Query 71141 CAATTGAGCTATAGGGCC 71158 ||| ||||||||||| || Sbjct 5944 CAACTGAGCTATAGGTCC 5961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544928465408040