Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1618 82.4 6e-11 >seq1618 Length=17866 Score = 82.4 bits (90), Expect = 6e-11 Identities = 153/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 41049 ATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCA 41108 ||||||||||| || ||||||| | | |||||| | || || | ||| || || Sbjct 9353 ATGGCATTGCCTCCCTGTCATTGCCTCTTTCAGTTCAATGTGAGCGAAGGTAGTCTTTCC 9294 Query 41109 TGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGT 41168 ||||| | || ||| | || | ||| || | || || ||||| || ||||| ||| Sbjct 9293 TGTCAGCTATACCAACGTTCGGCTGATATTTTTTTGGGAGTGCCGTTCAATATAGCCAGT 9234 Query 41169 TATGCTCTGCTCACGTAT-ATGATTGCACACGTTACCAATTTAAAACCTGGTGAATTTGT 41227 || || || | || ||| ||||| || || || ||| | ||| | ||||| ||||| Sbjct 9233 TACGCGTTGTTGAC-TATGATGATGGCTCAAGTGTGCAACCTCAAAGCAGGTGACTTTGT 9175 Query 41228 TCACACGTTAGGAGATGGACATATTTACATTAATCACATAGA 41269 || || || ||||||| ||| || || | || |||||||| Sbjct 9174 ACATACCTTTGGAGATGCACACATCTATAAAAACCACATAGA 9133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397431300469495