Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq115 95.1 1e-14 >seq115 Length=162362 Score = 95.1 bits (104), Expect = 1e-14 Identities = 236/355 (66%), Gaps = 5/355 (1%) Strand=Plus/Minus Query 24753 GGCAAGGTGCAGGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTAT 24812 || ||||| |||||| || ||| ||||| || || || ||||| || ||||||||| Sbjct 121582 GGAAAGGTACAGGAGGTTCCGCAGAGCGAGACTACACCGTTCTATCCCCGTAGCCCGTAT 121523 Query 24813 GGGGTCTCAAAGGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGATA 24872 | || | || ||| || | |||||| | ||||| || || ||| | | || || Sbjct 121522 GCCGTAGCCAAACTGTACGGCTTCTGGATTATGAAGAATTATCGCGAGAGCTACGGCATG 121463 Query 24873 TATGCATGCAACGGAATTCTGTTCAACCATGAGTCGGAGCGTCGGGGACCTGAATTTGTT 24932 ||| ||||||||||| |||||||||||||| |||||||| || ||| || Sbjct 121462 TATTGCTGCAACGGAATCCTGTTCAACCATGAAAGCGAGCGTCGCGGCGAAACATTCGTA 121403 Query 24933 ACACGAAAGATTACTCTTGGTATTGAC-CATTGGATCAAG---ACAAGGGCACCTATTGA 24988 || || ||||| || |||| | | | | | | ||||| | ||| || || | Sbjct 121402 ACCCGTAAGATAACGCTTGCTGCCGCCAGAATAGCTCAAGGTTTCCAGGACA-AACTTTA 121344 Query 24989 GCTGGGAAACCTAGATGCCAAACGTGATTGGGGGCATGCAGCCGACTACGTCGACGCCAT 25048 ||||| ||| | | || ||||| ||||| ||||| |||||| | || ||| Sbjct 121343 TCTGGGTAACATCAACTCCCTCCGTGACTGGGGATATGCAAAAGACTACATTGAATGCAT 121284 Query 25049 GTGGCGCATGCTCCAACAGAATAAGCCAGAGGATTTTGTGATCGGCACCGGTCAG 25103 ||||| || | |||||| |||| || || ||||| || | || ||| || Sbjct 121283 GTGGCTTATCTTGCAACAGCCGGAGCCCGACGACTTTGTCATTGCTACAGGTGAG 121229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570274049840880