Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_028676.1 Length=149218 Score E Sequences producing significant alignments: (Bits) Value seq3719 107 2e-18 >seq3719 Length=49728 Score = 107 bits (118), Expect = 2e-18 Identities = 173/246 (70%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 119665 GGTTCACGTTCGAGCTGCTCTTTCACCTGGTCGAAGTGATTGAGGTAGATGTGCGTGTCT 119724 || || ||| ||||||| |||||||| |||| ||| ||| |||||| ||| ||| Sbjct 23590 GGCTCTCGTGAGAGCTGCAGCTTCACCTGTTCGATGTGGTTGTTGTAGATATGCACGTCG 23649 Query 119725 CCGAAGCTGCCGATCAGTTCGCCGACTTCGAGATTGCATTCTCGAGCAATGATGTGAGTC 119784 |||||| | || | || ||| |||||||| ||| | |||| || || ||| Sbjct 23650 CCGAAGGTATGGACGAAATCACCGGGTTCGAGATCGCACACCTGAGCCATCATCATGGTC 23709 Query 119785 AGAAGAGCGTACGACGCGATGTTGAACGGAAGACCGAGGAACACATCGACTGACCTCTGG 119844 || || | ||||| |||||||||||||| | ||||| ||||| ||| | || | ||| Sbjct 23710 AGCAGCGAATACGAAGCGATGTTGAACGGCACGCCGAGAAACACGTCGGCCGAGCGTTGG 23769 Query 119845 TTCCAGAT-GCACGAGAGCTTCTTGTTTCGTACGTAGAACTGGAAAGAGTAGTGACACGG 119903 | || | |||||| ||||| |||| || ||||||||||| || ||||| || Sbjct 23770 -TAAAGCTGGCACGACAGCTTGCCGTTTGCCACATAGAACTGGAAGAAGGCATGACAGGG 23828 Query 119904 AGGAAG 119909 ||| || Sbjct 23829 AGGCAG 23834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477339173655120