Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq2787 84.2 2e-11 >seq2787 Length=4209 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/168 (72%), Gaps = 7/168 (4%) Strand=Plus/Plus Query 139426 GGGTCGTTAATGAAACCTTTCCAACCTACAGTTGTTCTTGGTTTCTCAAAATAAACACGC 139485 || |||||||| ||||||||||| || || || ||||||||||| |||||||| |||||| Sbjct 2159 GGATCGTTAATCAAACCTTTCCAGCCCACTGTGGTTCTTGGTTTTTCAAAATACACACGC 2218 Query 139486 ATAACCAAAAGAAG---AT--TTGGAAATTGTTTTTGTACTTCGGCTAAACGTTCGCCGT 139540 |||| | | | || || ||| ||| || | | | | || | ||| | | | | Sbjct 2219 ATAATAATATGCAGTGTATCCTTG--TATTTTTCTCTCAATACAGCCAGACGGTTGGCAT 2276 Query 139541 ATTCGAGAGCAGCTTTAGGGTCATGAATTGAACAAGGGCCTACAACAA 139588 |||| | || | |||||| ||||| ||||| ||||| || ||||| Sbjct 2277 ATTCAATGGCCGATTTAGGATCATGGATTGAGCAAGGACCGGTAACAA 2324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568293376092120