Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_028762.1 Length=161989 Score E Sequences producing significant alignments: (Bits) Value seq2701 96.9 4e-15 seq2941 82.4 8e-11 >seq2701 Length=6067 Score = 96.9 bits (106), Expect = 4e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 55540 AGTAAATGTTCTGTTAATAACATCTTCTTTCTGTTCTGCAGTCAGAGAATTAAATCTGAC 55599 ||| || ||||| | | |||||| | | ||||||| || | ||| || || | || Sbjct 5354 AGTGAAAGTTCTTGTTACAACATCCTGCTGCTGTTCTTTGGTTAAAGAGTTGAAACGTAC 5295 Query 55600 GGCATACCCAGAAACGCGAATTGTTAATTGTGGATATTTTTCAGGATGTTCTTTAGCATC 55659 ||||| || ||||| || ||||| | | |||||||||||||| ||||| | ||||| Sbjct 5294 AGCATAACCTGAAACACGGATTGTCAGTGTAGGATATTTTTCAGGGTGTTCCATTGCATC 5235 Query 55660 TAACAACATTTCTTTATTAAGAACATTGACATTCAGATGTTGTCCACCTTC 55710 | || ||||| | || ||||| || ||||||||||| || || ||||| Sbjct 5234 GAGCAGTGTTTCTCTGTTGAGAACGTTCACATTCAGATGCTGACCGCCTTC 5184 >seq2941 Length=2426 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 64869 CTACAGGATTCGAACCTGTGACCTAGGGCTTAGAAGGTCCTTGCTCTATCCAACTGAGCT 64928 ||| ||||||||||||| ||||||| ||||||||||| | |||||||||||| |||||| Sbjct 2279 CTATAGGATTCGAACCTATGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAGCTGAGCC 2338 Query 64929 AAG 64931 ||| Sbjct 2339 AAG 2341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518203768881960