Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20]
5,099 sequences; 74,234,735 total letters
Query= NC_028780.1
Length=167124
Score E
Sequences producing significant alignments: (Bits) Value
seq2964 125 8e-24
seq2701 89.7 5e-13
>seq2964
Length=2227
Score = 125 bits (138), Expect = 8e-24
Identities = 511/792 (65%), Gaps = 15/792 (2%)
Strand=Plus/Minus
Query 120025 GGATTGATTCATAAAACTAATAAAGACCTTTTAAACGAGAATGCTAATAAAGATTCTCGT 120084
||| |||| || | | ||| ||| || | ||||||||||| || || ||
Sbjct 1888 GGACTGATCGATCAGTCAAATGCAGATCTGCTTAACGAGAATGCCAACAAGGACAGCAAG 1829
Query 120085 GTTTTTCCAACTCAACGGGACCTTATGGCTGGTATTGTGTCTAAACACATTGCCAAAAAT 120144
||| |||| || || || |||||| | || |||||||| | ||| ||| ||| |
Sbjct 1828 GTTATTCCGACCCAGCGTGACCTTCTTGCAGGTATTGTTGCACGCCACTATGCAAAACAG 1769
Query 120145 ---ATGGTCCCGTCTTTTA-TTATGAAAGCGCATGAAAGCGGAATTATCCATTTCCACGA 120200
||| | || || | || ||| ||| |||||||| || |||||||| |||||
Sbjct 1768 CACATGCTTCC-TCAGGAAGTTGTGAGAGCCCATGAAAGAGGGGAGATCCATTTTCACGA 1710
Query 120201 TATTGATTATTCCCCTGCTCTTCC--ATTTACTAATTGCTGTTTAGTAGATTTAAAAGGA 120258
| | || ||||| || | |||||| || | | | | || | | | ||| | |||
Sbjct 1709 TCTCGACTATTCACC-GTTCTTCCCGATGTTCAACTGTATGCTGA-TCGATGTCGGCGGA 1652
Query 120259 ATGCTTGAAAACGGATTTAAGCTAGGTAATGCACAGATTGAAACTCCTAAATCAATTGGC 120318
||||| ||| ||| || ||| | |||||||| | || ||| | ||||| ||||| |
Sbjct 1651 ATGCTGGAACGCGGTTTCAAGATGGGTAATGCCGAAATCGAATCACCTAAGTCAATCAGT 1592
Query 120319 GTTGCTACTGCAATTATGGCACAAATTACTGCACAGGTTGCTTCTCACCAATACGGCGGA 120378
|| || || ||| ||||| || | || |||||||| || ||||||||
Sbjct 1591 ACCGCAACCGCGGTTACCGCACAGATCATCGCCCAGGTTGCCAGCCATATCTACGGCGGT 1532
Query 120379 ACGACTTTTG-CGAATGTAGATAAAGTACTTTCTCCTTATGTTAAACGCACCTATGCAAA 120437
|| || | | ||| ||| | || ||| | || ||||||| | | | ||
Sbjct 1531 ACAACCATCAACCGCTGT-GATGAGGTGCTTGCCCCGTATGTTA--CCAAGAGTTTCATG 1475
Query 120438 ACATATT-GAGGATG-CAGAAAAATGGCAAATCGCCGATGCGTTGAATTATGCTCAATCT 120495
| ||| || |||| | || | ||||| || | ||| || | | ||| | | |
Sbjct 1474 AAGTATCAGAAGATGGCCGAGGAGTGGCACATTCCTGATCCGGACAGCTTTGCCCGAGCC 1415
Query 120496 AAAACAGAAAAAGACGTATACGATGCATTCCAAGCTTATGAATATGAAGTAAATACTCTC 120555
|| ||||| || || || || ||||| || ||||||||||||||| || ||
Sbjct 1414 CGTACTGAAAAGGAGTGCTATGACGCCTTCCAGTCTCTTGAATATGAAGTAAACACCCTG 1355
Query 120556 TTTAGTTCAAACGGACAGACTCCTTTTGTAACAATTACATTTGGTACGGGAACTGACTGG 120615
|| || ||||| |||||||| || ||||| | || ||| |||||| ||||
Sbjct 1354 CATACCTCCAACGGTCAGACTCCGTTCGTAACTCTCGGTTTCGGTCTGGGAACATCCTGG 1295
Query 120616 ACTGAACGAATGATTCAGAAAGCAATTCTGAAAAATCGTATTAAAGGTCTTGGTCGTGAT 120675
||| |||| ||||| | |||||||| || | ||| ||||| || || ||
Sbjct 1294 GAGTCACGTCTGATCCAGAAGTCTATTCTGAAGAACAGAATTGCTGGTCTCGGCCGCAAT 1235
Query 120676 GGGATAACTCCTATTTTCCCTAAGCTTGTTATGTTCGTTGAAGAAGGTGTTAATCTTTAT 120735
| |||| | ||||||||||||| || | | | | || || | || | | |
Sbjct 1234 CACAGAACTGCGGTTTTCCCTAAGCTGGTGTTTGCCATCAAGGAGGGACTGAACCGTAAA 1175
Query 120736 AAAGACGATCCGAACTATGATATTAAGCAGCTTGCTCTAGAGTGCGCAAGCAAAAGGATG 120795
| | ||||| ||||| ||||| ||| |||| ||||| || ||||| ||| || |||
Sbjct 1174 GAGGGTGATCCTAACTACGATATCAAGAAGCTGGCTCTTGAATGCGCCTCCAAGAGAATG 1115
Query 120796 TATCCTGATATT 120807
||||| ||||||
Sbjct 1114 TATCCGGATATT 1103
>seq2701
Length=6067
Score = 89.7 bits (98), Expect = 5e-13
Identities = 130/184 (71%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 101919 GAAGGTGGTCAACACCTGAACGTTAACGTTTTGCGTCGTGAAACTCTGGAAGATGCAGTT 101978
||||| ||||| || ||||| || |||||| | | ||||| ||| |||||| |
Sbjct 5184 GAAGGCGGTCAGCATCTGAATGTGAACGTTCTCAACAGAGAAACACTGCTCGATGCAATG 5243
Query 101979 AAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTT 102038
| || || ||||||||||| ||||| |||||||| || |||||||| || || ||
Sbjct 5244 GAACACCCTGAAAAATATCCTACACTGACAATCCGTGTTTCAGGTTATGCTGTACGTTTC 5303
Query 102039 AACTCTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTCACCGAGAGTTTG 102098
|||||| | || |||||||||| || ||| | | | || ||||| ||| ||
Sbjct 5304 AACTCTTTAACCAAAGAACAGCAGCAGGATGTTGTAACAAGAACTTTCACTCAGAAGCTG 5363
Query 102099 TAAT 102102
||||
Sbjct 5364 TAAT 5367
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 534634721547360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |