Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_028808.1 Length=90743 Score E Sequences producing significant alignments: (Bits) Value seq3868 123 1e-23 >seq3868 Length=178294 Score = 123 bits (136), Expect = 1e-23 Identities = 301/451 (67%), Gaps = 5/451 (1%) Strand=Plus/Minus Query 12369 TACAGCATCTTTTGGTGTAACTGCATTAGATGAGTTAACAGTGCTTGCCCAAGGTAAAAG 12428 |||||| || |||||| | |||||||| ||||||| ||| || ||| | ||| Sbjct 146103 TACAGCCTCATTTGGTATTACTGCATTTAATGAGTTG-CAGGAATTATACAATGGCAAAT 146045 Query 12429 GTTGCATGAATCTGATGGTGATATTGCAAGTAAGGTTTTAAGCTACCTGAATAGCAAGCT 12488 | || | ||||| || |||||| | ||||||||| || | ||| ||| | Sbjct 146044 CTCTTGTGGAA--GATGGCGAGTTTGCAATTGAGGTTTTAAAGCACATAAATGATAAGGT 145987 Query 12489 GGAGCAGTTTAAGCAGGAAGATGGTT-TCTTGTATGCCCTCTATGGTACACCTGCTGAGA 12547 | ||||| ||| | || ||||| |||| ||||| | |||||||| |||||||||| Sbjct 145986 TAATCAGTTCAAGGAAGAGGATGGCAATCTT-TATGCTATTTATGGTACTCCTGCTGAGA 145928 Query 12548 GCCTTTGTGGTACGCAATTGAAGCAGTTCAGAAATATGTTCGGAGTTGTTAAAGGTGTTT 12607 || ||||| ||| | |||||||||||||||| | |||| | || || ||||| Sbjct 145927 ATCTATGTGGATTGCAGGTAAAGCAGTTCAGAAATAAATACGGAATAGTAGAAAATGTTT 145868 Query 12608 CTGATAAAGAATACTTTACAAATAGTTTTCACATGAATGTTGGTGCAGATATCACACCGT 12667 |||||| ||||| || | ||| || || ||||| || ||||| || || Sbjct 145867 CTGATAGGGAATATGTTTCTAATTCATTCCATTGTCATGTTACTGAGGATATTACTCCTA 145808 Query 12668 TTGAAAAGCAAGACTTAGAAGAACCTTTCTTCCATTCTTGTAATGGAGGCCATATCCAGT 12727 |||||||||| ||| |||| | ||||| | || ||||| ||| | || || | Sbjct 145807 TTGAAAAGCAGGACAAGGAAGGCCGTTTCTGGGAAATGTGCAATGGTGGCAAAATACAAT 145748 Query 12728 ATGTTCGTATCGCTAACCCAGAGAACCACAAAGCCATTAGAGCTTGTGTAACAAGGGGTA 12787 |||||||| | | | | | || | | |||| | | | || ||||| | | | | Sbjct 145747 ATGTTCGTTACCCAATCAACTACAATCGCGAAGCGGTCAAAACTCTTGTAAGACGTGCAA 145688 Query 12788 TGGGTAAAGGTTTCTATCAAGGTGTTAACTT 12818 ||| || || |||||| | ||||| || || Sbjct 145687 TGGACAAGGGATTCTATGAGGGTGTCAATTT 145657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 290234762511856