Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_028809.1 Length=58637 Score E Sequences producing significant alignments: (Bits) Value seq4369 84.2 8e-12 seq4677 80.6 1e-10 >seq4369 Length=71463 Score = 84.2 bits (92), Expect = 8e-12 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 3359 CGCGAGGTAGAGCAGCTGGAAGCTCGCCGGGTTCATACTCCGGAGGTCGCGGGTTCGAGT 3418 |||||||| |||||| ||| |||||||| || ||||| | ||||||||| |||||||| Sbjct 2549 CGCGAGGTGGAGCAGTTGGTAGCTCGCCAGGCTCATAACCTGGAGGTCGCATGTTCGAGT 2608 Query 3419 CCCGCCCTCGCAAC 3432 || ||||||||||| Sbjct 2609 CCTGCCCTCGCAAC 2622 >seq4677 Length=22966 Score = 80.6 bits (88), Expect = 1e-10 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 3359 CGCGAGGTAGAGCAGCTGGAAGCTCGCCGGGTTCATACTCCGGAGGTCGCGGGTTCGAGT 3418 |||| |||||||||| || |||||| |||| ||||| ||||||||||| ||||||||| Sbjct 21070 CGCGGGGTAGAGCAGTCGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCGAGT 21129 Query 3419 CCCGCCCTCGCAACCAA 3435 || |||| ||| || || Sbjct 21130 CCTGCCCCCGCTACTAA 21146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187505445740562