Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq4079 136 1e-27 seq4483 134 4e-27 seq1312 132 2e-26 seq3148 131 5e-26 seq2324 131 5e-26 seq112 129 2e-25 seq5018 127 7e-25 seq4669 122 3e-23 seq2179 120 1e-22 seq3058 118 3e-22 seq4239 114 4e-21 seq2440 107 6e-19 seq496 104 7e-18 seq755 95.1 4e-15 seq3449 89.7 2e-13 seq3754 86.0 2e-12 seq2622 84.2 7e-12 >seq4079 Length=28942 Score = 136 bits (150), Expect = 1e-27 Identities = 166/224 (74%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 40169 TCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCG 40228 || ||||||||| | || | ||||||| ||| | || |||||||||||||| |||||| Sbjct 12038 TCGTCGAAGTCGGTATCGATATCGGGCAGGGAGATACGGTCGGGGTTCAGGAAACGCTCG 12097 Query 40229 AAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTAGGCGACCAGC 40288 || | || ||| || ||| || |||| | ||||| || ||||||||||| |||| Sbjct 12098 AACAGCAGGTCGTACTTCAGCGGGTCGATCTTCGTGATGCCCAGGCAGTAGGCCACCACA 12157 Query 40289 GAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGCC--GTTC-TCCTTGGCCCAG 40345 ||||||||||||||| || || || || ||| |||||| |||| || ||| || Sbjct 12158 CTACCGGCTGCCGAGCCACGGCCTGGCCCCACCATCACGCCCAGTTCGTCGCGGGCGGAG 12217 Query 40346 CCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCCCAT 40389 ||||||||| |||| ||||||||| ||||||||||| Sbjct 12218 TTGATGAAGTCCTGTACGATGAGGAAGTAGCCGGGGAAGCCCAT 12261 >seq4483 Length=5740 Score = 134 bits (148), Expect = 4e-27 Identities = 213/303 (70%), Gaps = 3/303 (1%) Strand=Plus/Plus Query 40090 GCCGAAGGTCCCGATCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGAT 40149 |||| |||| ||| || || || |||||| ||||| ||||| || || || | | Sbjct 3560 GCCGTAGGTGATGATATGCGCCACGCGGTCGGCTCCGTATTTCTCCGTCACCCACTGCAA 3619 Query 40150 GACCTCGCCGCGACGCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTC 40209 |||| ||| || | ||||||||| || | ||| | ||||||| || | || || Sbjct 3620 TACCTTGCCTCGCCCGTCGTCATCGAAATCCACGTCGATATCGGGCAGTGAGATACGGTC 3679 Query 40210 GGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCC 40269 ||| || ||||| |||||||| | ||| ||| | || ||||| | ||||| || Sbjct 3680 GGGATTGAGGAAACGCTCGAACAGGAGATCGTATTTCAACGGATCCACCATCGTGATGCC 3739 Query 40270 GAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGCC 40329 |||||||||||| |||| || ||||| || || || ||||| ||||| ||||| ||||| Sbjct 3740 GAGGCAGTAGGCCACCACAGATCCGGCGGCGGAACCACGCCCCGGACCAACCCATACGCC 3799 Query 40330 --GTTC-TCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCC 40386 |||| | ||| ||| ||| | || ||||| ||||||||| |||||| || Sbjct 3800 CAGTTCTTTCTTCGCCACATTGATATAATCCTGTACGACGAGGAAGTAGCCCGGGAATCC 3859 Query 40387 CAT 40389 ||| Sbjct 3860 CAT 3862 >seq1312 Length=3891 Score = 132 bits (146), Expect = 2e-26 Identities = 237/342 (69%), Gaps = 13/342 (4%) Strand=Plus/Minus Query 40091 CCGAAGGTCCCGATCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGATG 40150 ||| |||| ||| || || || || ||||||||||| || ||||| || || | | Sbjct 3334 CCGTAGGTGATGATATGGGCCACTTTCTCGGCCCCGTATTTGTCGGTCACCCACTGCAGC 3275 Query 40151 ACCTCGCCGCGACGCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCG 40210 |||| || || | ||| |||||||| | ||| | || || | ||| | || || Sbjct 3274 ACCTTACCTCGTCCGTCGTCGTCGAAGTCCACGTCGATATCCGGGAGGGAGATACGGTCC 3215 Query 40211 GGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCG 40270 ||||| ||||| |||||||| | ||| ||| || | || || | ||||| || Sbjct 3214 GGGTTGAGGAATCGCTCGAACAGGAGGTCGTACTTGATGGGGTCCACCATCGTGATGCCC 3155 Query 40271 AGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGCCG 40330 |||||||| || || || || |||||||| || || ||||| || |||||||||||| Sbjct 3154 AGGCAGTATGCCACTGTGGAGCCTGCTGCCGACCCACGGCCAGGTCCCACCCACACGCCG 3095 Query 40331 TTCTCCTTGGCCCAGCC-----GATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGC 40385 ||| || || ||| ||| |||||| ||||| ||||||||| |||||||| Sbjct 3094 AGCTCGTT--CCTCGCCGCATTGATATAGTCGGATACGACGAGGAAGTAGCCCGGGAAGC 3037 Query 40386 CCA---TCTGGATGATCATGTCGATCTCGTACTGGAGCTGCT 40424 ||| ||| ||||| ||| | |||| ||| || ||||| Sbjct 3036 CCATGGTCTTCATGAT-ATG--CAGCTCGAACTTGATCTGCT 2998 >seq3148 Length=25767 Score = 131 bits (144), Expect = 5e-26 Identities = 190/266 (71%), Gaps = 7/266 (3%) Strand=Plus/Minus Query 40151 ACCTCGCCGCGACGCCG--GTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCT 40208 |||| ||||| |||| ||| ||||||||| |||| | ||||||| || | ||| | Sbjct 8185 ACCTTTCCGCG--GCCGTCGTCGTCGAAGTCGGTGTCGATATCGGGCAGCGAGATGCGGT 8128 Query 40209 CGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCC 40268 ||||||| ||||| |||||||| | ||| ||| || ||| || |||| | |||||| | Sbjct 8127 CGGGGTTGAGGAAACGCTCGAACAGGAGGTCGTACTTCAGCGGGTCGATCTTGGTGATGC 8068 Query 40269 CGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGC 40328 | || |||||||| |||| ||||| || || || || || || || ||||| ||| Sbjct 8067 CCAGACAGTAGGCCACCACTGAACCTGCCGCACTACCACGGCCGGGGCCCACCCAGACGT 8008 Query 40329 CGTTCTCCTTG---GCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGC 40385 || ||| | | ||| | ||||||||| |||| ||||||||| ||||||| Sbjct 8007 CGAGCTCGTCGCGGGCCGAATTGATGAAGTCCTGCACGATGAGGAAGTAGCCGGGGAAGC 7948 Query 40386 CCATCTGGATGATCATGTCGATCTCG 40411 ||||| | || |||| || |||| Sbjct 7947 CCATCGTCTTCATGATGTGGAGCTCG 7922 >seq2324 Length=83463 Score = 131 bits (144), Expect = 5e-26 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 40168 GTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTC 40227 ||| |||||||| | ||| | |||||||||| | | ||||| || ||||| ||||| Sbjct 20531 GTCGTCGAAGTCCACGTCGATGTCGGGCATGCTGATCCTTTCGGGATTGAGGAAACGCTC 20472 Query 40228 GAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTAGGCGACCAG 40287 ||| | || ||| | || || ||||||| |||||| | ||||||||| || | Sbjct 20471 GAACAGCAGGTCGTACCGGAGAGGGTCGAGGTTGGTGATGCGCAGGCAGTAGCTCACAAC 20412 Query 40288 CGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGCCGTTCTCCTTGGCCCAGCC 40347 |||||| || || ||| ||||| ||||| ||| |||| ||||| | |||||||||| Sbjct 20411 CGAACCTGCGGCGCTGCCGCGCCCCGGACCCACCGACACCCCGTTGTTCTTGGCCCAGTT 20352 Query 40348 GATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCCCATCTG 40392 || ||||| ||| | ||||||||| ||||||||||| || Sbjct 20351 TATAAAGTCCTGGACTATGAGGAAGTAGTCGGGGAAGCCCATGTG 20307 >seq112 Length=216842 Score = 129 bits (142), Expect = 2e-25 Identities = 164/225 (73%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 40168 GTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTC 40227 ||| ||||||||| |||| | ||||||| ||| | ||| ||||| || ||||||||||| Sbjct 51939 GTCGTCGAAGTCGGTGTCGATATCGGGCAGGGAGATGCGGTCGGGATTGAGGAACCGCTC 51998 Query 40228 GAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTAGGCGACCAG 40287 ||| | || ||| || || || || | | ||||| |||||||| ||||| |||| Sbjct 51999 GAACAGCAGGTCGTACTTGAGCGGGTCTATCTGTGTGATGCCGAGGCAATAGGCCACCAC 52058 Query 40288 CGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGCCGTTCTCCTTG---GCCCA 40344 ||||||||||||||||||||| || || || ||| ||||| || ||| || Sbjct 52059 CGAACCGGCTGCCGAGCCTCGTCCGGGTCCCACCATGACGCCAAGATCGTTGCGTGCGGC 52118 Query 40345 GCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCCCAT 40389 | ||||||||| || | ||||||||| ||||| ||||| Sbjct 52119 GTTGATGAAGTCCTGCACAATGAGGAAGTAGCCGGGGAATCCCAT 52163 >seq5018 Length=27970 Score = 127 bits (140), Expect = 7e-25 Identities = 212/304 (70%), Gaps = 3/304 (1%) Strand=Plus/Minus Query 40090 GCCGAAGGTCCCGATCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGAT 40149 |||| |||| ||| || || || ||||| |||||||| || || | ||| Sbjct 10798 GCCGTAGGTGATGATATGAGCCACGCAATCGGCACCGTACTTTTCCTGCACCCATTCGAT 10739 Query 40150 GACCTCGCCGCGACGCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTC 40209 |||| | | || | ||| ||||||||| | |||| ||||||| ||| | || || Sbjct 10738 AACCTTGGCACGTCCGTCGTCGTCGAAGTCGGTATCAATATCGGGCAAGGAGATACGGTC 10679 Query 40210 GGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCC 40269 || || ||||| || ||||||| ||| ||| | |||||| ||||| | |||||| || Sbjct 10678 AGGATTGAGGAAACGTTCGAAGAGGAGGTCGTATTTCAGTGGGTCGAGTTTGGTGATGCC 10619 Query 40270 GAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGCC 40329 || || || || || | |||||||||||| || |||||||| ||||| ||| | ||||| Sbjct 10618 CAGACAATAAGCCACTACCGAACCGGCTGCGGAACCTCGCCCGGGACCCACCGAAACGCC 10559 Query 40330 GTTCTCCTT-GGCCCAGC--CGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCC 40386 || || | ||| |||||| || |||| ||||||||| |||||| || Sbjct 10558 CAATTCGTTACGTGAAGCGTTGATGAAATCCTGCACGATGAGGAAGTAGCCCGGGAAACC 10499 Query 40387 CATC 40390 |||| Sbjct 10498 CATC 10495 >seq4669 Length=35002 Score = 122 bits (134), Expect = 3e-23 Identities = 178/249 (71%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 40164 GCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACC 40223 || ||| |||||||||| ||| | |||||||| || | ||| ||||| || ||||| | Sbjct 7129 GCAGGTTCTCGAAGTCGACGTCGATATCGGGCATCGAGATGCGGTCGGGATTGAGGAAAC 7070 Query 40224 GCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTAGGCGA 40283 ||||||| | ||| || || || || ||||||| |||||| || |||||||| |||| Sbjct 7069 GCTCGAACAGGAGGTTGTACTTGAGGGGGTCGAGGTTGGTGATACCCAGGCAGTAAGCGA 7010 Query 40284 CCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGCCGTTC-TCCTTGGCC 40342 | | |||||||| || ||||| || || || ||| ||||| | | | | Sbjct 7009 CGACGCTTCCGGCTGCGGAACCTCGGCCGGGGCCCACCAGGTAGCCGTGCCTGCGAGAGG 6950 Query 40343 CAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCCCATCTGGATGATCATG 40402 | || |||| |||| ||||| ||||||||| ||||||||||||| | |||| | Sbjct 6949 CGGC-GATGTAGTCCTGGACGATGAGGAAGTAGTCGGGGAAGCCCATCTTGCTGATGGTC 6891 Query 40403 TCGATCTCG 40411 | || |||| Sbjct 6890 TTGAGCTCG 6882 >seq2179 Length=6749 Score = 120 bits (132), Expect = 1e-22 Identities = 167/233 (72%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 40091 CCGAAGGTCCCGATCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGATG 40150 |||||||| | ||||| || || |||| |||||| || ||||| ||||| ||| Sbjct 727 CCGAAGGTTACAATCTGCGCCACGCGGTCGCTCCCGTATTTTTCGGTAACGTAGTCGATA 786 Query 40151 ACCTCGCCGCGACGCCGGTCATCG---AAGTCGATGTCAACGTCGGGCATGGACACGCGC 40207 ||||| |||| | || | | ||||| || |||| || ||||| || |||||| Sbjct 787 ACCTCCT---GACGTCTTTCGTAGCAGAAGTCAATATCAAAATCAGGCATTGAAACGCGC 843 Query 40208 TCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATC 40267 ||||| |||| || ||||| || ||||| ||| | || || || ||||||||||| Sbjct 844 TCGGGATTCAAAAAGCGCTCAAAAATGAGGTCGTATTTCATCGGGTCAAGGTCGGTGATT 903 Query 40268 CCGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGAC 40320 |||| ||||| || | ||||| || || |||| |||||||| ||||| || Sbjct 904 CCGATACAGTAAGCTGCGAGCGAGCCCGCGCCCGAACCTCGCCCGGGACCTAC 956 >seq3058 Length=36741 Score = 118 bits (130), Expect = 3e-22 Identities = 188/269 (70%), Gaps = 3/269 (1%) Strand=Plus/Plus Query 40124 CCGTACTTCTCGGTGACGTACCGGATGACCTCGCCGCGACGCCGGTCATCGAAGTCGATG 40183 |||||||| || | || || | | |||| ||||| | ||| |||||||| || Sbjct 17840 CCGTACTTGTCCATAACCCACTGCAACACCTTACCGCGTCCGTCGTCGTCGAAGTCAGTG 17899 Query 40184 TCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGC 40243 || | || |||| || | || || || || ||||| |||||||| | || | | | Sbjct 17900 TCGATATCTGGCAGTGAGATACGGTCAGGATTGAGGAAACGCTCGAACAGCAGGTCATAC 17959 Query 40244 TCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAG 40303 | || || ||||| | || || ||||| ||||||||||||| || ||||| |||||| Sbjct 17960 TTCAACGGGTCGAGCTTAGTTATGCCGAGACAGTAGGCGACCACTGAGCCGGCAGCCGAG 18019 Query 40304 CCTCGCCCAGGACCGACCCACACGCCGTTCTCCT---TGGCCCAGCCGATGAAGTCGGCG 40360 || || ||||| || ||||||||| | ||||| ||| || ||||||||| Sbjct 18020 CCACGTCCAGGTCCTACCCACACGTCAAGCTCCTGTCGCGCCGAGTTGATGAAGTCCTGC 18079 Query 40361 ACGACCAGGAAGTAGGACGGGAAGCCCAT 40389 || | |||||||| |||||||||||| Sbjct 18080 ACAATGAGGAAGTAACCCGGGAAGCCCAT 18108 >seq4239 Length=97330 Score = 114 bits (126), Expect = 4e-21 Identities = 173/243 (71%), Gaps = 5/243 (2%) Strand=Plus/Minus Query 40151 ACCTCGCCGCGACGCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCG 40210 |||| ||| |||| ||| |||||||| | || | ||||||| || | ||| || Sbjct 51816 ACCTTGCCCCGACCGTCGTCGTCGAAGTCAGTATCGATATCGGGCAGAGAGATGCGGTCA 51757 Query 40211 GGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCG 40270 ||||||||||| ||||| |||| | ||| || ||| || ||||| || || || Sbjct 51756 GGGTTCAGGAAACGCTCAAAGAGCAAATCGTACTTCAGCGGGTCGAGCCTCGTAATGCCC 51697 Query 40271 AGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGCC- 40329 ||||| || || |||| ||| || || ||||| |||| ||||| || |||||||| || Sbjct 51696 AGGCAATAAGCAACCACCGACCCCGCCGCCGAACCTCTGCCAGGGCCAACCCACACACCC 51637 Query 40330 -GTTC--TCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCC 40386 | || ||||| || | | ||||||||| || | ||||||||| |||||||| Sbjct 51636 AGCTCGTTCCTT-GCGCTGTTGATGAAGTCCTGCACAATGAGGAAGTAGCCAGGGAAGCC 51578 Query 40387 CAT 40389 ||| Sbjct 51577 CAT 51575 >seq2440 Length=54041 Score = 107 bits (118), Expect = 6e-19 Identities = 159/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 40168 GTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTC 40227 ||| |||||||| | ||| | || |||||||| | |||||| || |||||||| ||||| Sbjct 29185 GTCGTCGAAGTCCACGTCTATATCCGGCATGGAGATGCGCTCCGGATTCAGGAAACGCTC 29126 Query 40228 GAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTAGGCGACCAG 40287 ||| | || ||| | || || |||| |||||| || ||||||||||| | | | Sbjct 29125 GAACAGCAGGTCGTAACGGATGGGGTCCAGGTTGGTGATGCCCAGGCAGTAGGCTA-CGG 29067 Query 40288 CG-AACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGCCGTTCTCCTTGGCCCAGC 40346 || || || || ||| || || || || || | | |||||| | |||||||||| Sbjct 29066 CGCTGCCCGCCGCGCTGCCGCGGCCCGGCCCCACGGAAATGCCGTTTTTCTTGGCCCAGT 29007 Query 40347 CGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCCCAT 40389 ||| || || || | ||||||||| |||||||||||| Sbjct 29006 TGATAAAATCCTGCACAATGAGGAAGTAGTCCGGGAAGCCCAT 28964 >seq496 Length=23570 Score = 104 bits (114), Expect = 7e-18 Identities = 159/226 (70%), Gaps = 3/226 (1%) Strand=Plus/Plus Query 40168 GTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTC 40227 ||| ||||||||| | || | ||||||| ||| | ||| || ||||||||||| || || Sbjct 16957 GTCGTCGAAGTCGGTATCGATATCGGGCAGGGAGATGCGGTCAGGGTTCAGGAAACGTTC 17016 Query 40228 GAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTAGGCGACCAG 40287 || | || | | || || || || || | || || || ||||| ||||| |||| Sbjct 17017 AAACAGCAGGTCATACTTCAAGGGGTCCAGTTTCGTAATGCCCAGGCAATAGGCCACCAC 17076 Query 40288 CGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGCCGTTCTCCTT---GGCCCA 40344 |||||| || ||||| || || || || ||||||||| | ||||| ||| | Sbjct 17077 GCTACCGGCAGCAGAGCCACGGCCCGGTCCCACCCACACGTCCAGTTCCTTGCGGGCGGA 17136 Query 40345 GCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCCCATC 40390 | ||||||||| |||| |||||||| |||||| |||||| Sbjct 17137 GTTGATGAAGTCCTGCACGATGAGGAAGTAACCCGGGAATCCCATC 17182 >seq755 Length=46149 Score = 95.1 bits (104), Expect = 4e-15 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 40167 GGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCT 40226 |||| || ||||| | ||| | || |||||||| | ||| || ||||| ||||| |||| Sbjct 19121 GGTCTTCAAAGTCCACGTCTATATCCGGCATGGAGATGCGGTCCGGGTTGAGGAAACGCT 19180 Query 40227 CGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTAGGCGACCA 40286 |||| | || || || | |||||| |||| |||||| | ||||||||||| || | Sbjct 19181 CGAACAGCAGTTGGTACTTGATTGGATCCAGGTTGGTGATGCGAAGGCAGTAGGCTACGA 19240 Query 40287 GCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACC 40321 || ||||| || |||||| ||||| || ||| Sbjct 19241 CGGAGCCGGCGGCGCTGCCTCGGCCAGGGCCCACC 19275 >seq3449 Length=4901 Score = 89.7 bits (98), Expect = 2e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 40168 GTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTC 40227 |||||||||||| | |||| ||||||| || | || ||||| |||||||| ||||| Sbjct 4754 GTCATCGAAGTCAGTATCAATATCGGGCAGCGAGATACGGTCGGGATTCAGGAAACGCTC 4813 Query 40228 GAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTAGGCGACCAG 40287 || | || ||| || || || || | | ||||| || | ||||||||| |||| Sbjct 4814 AAACAGCAGGTCGTACTTCATGGGGTCTATCTTCGTGATGCCCAAGCAGTAGGCCACCAC 4873 Query 40288 CGAACCGGCTGCCGAGCCTCGCCCAGG 40314 ||| ||||| ||||| || || ||||| Sbjct 4874 CGAGCCGGCAGCCGAACCACGTCCAGG 4900 >seq3754 Length=142177 Score = 86.0 bits (94), Expect = 2e-12 Identities = 193/287 (67%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 40047 GCACGCGGGCCGCGTCCTTCATCGC--GTTGCGCG-CCTTGATCCGGCCGAAGGTCCCGA 40103 ||||||||||| | ||||| || || ||| || | || || | | || |||| || Sbjct 112130 GCACGCGGGCCACATCCTTTATGGCCAGTTTCGTGGCCATGGTAC---CGTAGGTGATGA 112074 Query 40104 TCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGATGACCTCGCCGCGAC 40163 | || || || || | | ||||| |||| ||||| | || |||| ||||| | Sbjct 112073 TGTGGGCCACATTTGCTTCGCCGTATTTCTGTGTGACCCATGAGAGCACCTTTCCGCGGC 112014 Query 40164 GCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACC 40223 ||| |||||||| | ||| | ||||| | || | || ||||| || ||||| | Sbjct 112013 CATCGTCGTCGAAGTCCACGTCGATATCGGGGAGCGAGATTCGGTCGGGATTTAGGAAAC 111954 Query 40224 GCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTAGGCGA 40283 |||| || | ||| ||| || | || || | | ||||| |||||||||||||| | Sbjct 111953 GCTCAAACAGGAGGTCGTACTTGATCGGGTCTACCTTAGTGATGCCGAGGCAGTAGGCCA 111894 Query 40284 CCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGCCG 40330 | | ||||| ||||| || || ||||| || || | |||||| Sbjct 111893 CGACGCTGCCGGCAGCCGAACCGCGTCCAGGCCCCACACTGACGCCG 111847 >seq2622 Length=9807 Score = 84.2 bits (92), Expect = 7e-12 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 39222 CCTCGGGCTTCTTCTTGCCCATGGCCCGACGCAGCAGGTCGGCCTGGCCCAGGCTGTAGC 39281 |||| || ||||||| |||||||| ||||||||||| || || ||||||| | |||| Sbjct 8003 CCTCCGGGATCTTCTTTCCCATGGCTCGACGCAGCAGATCCGCGCCGCCCAGGGTATAGC 8062 Query 39282 CAGCGAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGTACGTCG 39341 | || || ||||||| || | |||||||||||||| | | | ||||| || | Sbjct 8063 CGGCAAGCGCCTGCGCCAGCTGCATTACCTGCTCCTGGTATACAACCACACCGTAAGTAG 8122 Query 39342 GGTCCAGGATC 39352 | || |||||| Sbjct 8123 GCTCAAGGATC 8133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160396687292226