Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_028829.1 Length=248088 Score E Sequences producing significant alignments: (Bits) Value seq2964 197 2e-45 >seq2964 Length=2227 Score = 197 bits (218), Expect = 2e-45 Identities = 472/707 (67%), Gaps = 19/707 (3%) Strand=Plus/Plus Query 125963 GAATGAGCGACAGCCCATTGGAGACTTAAACCCACCAGTCGTTTCAACTAGTTTGTCATA 126022 ||||||||| |||||||| |||| ||| || ||| || | || | | || || Sbjct 1037 GAATGAGCGGCAGCCCATCGGAGTCTTGAATGAACCGGTAACCTTCACAACCTGATCGTA 1096 Query 126023 GTTCAAAATGTCTGGGTACATACGCTTACTTGCACATTCAAGAGCTAACTTTTTGATGCC 126082 ||||| ||| || || ||||| | ||| || ||||||||||| | ||| ||||| | Sbjct 1097 GTTCAGAATATCCGGATACATTCTCTTGGAGGCGCATTCAAGAGCCAGCTTCTTGATATC 1156 Query 126083 GTAGCACGGGTCGCCTTCTTTCAGATTCACGCCGTCTCTCAATGTGAAA-ACAAGCTTAG 126141 |||| || || || ||||| | |||| || || || ||| ||| || ||||||| Sbjct 1157 GTAGTTAGGATCACCCTCTTTACGGTTCAGTCCCTC-CTTGATGGCAAACACCAGCTTAG 1215 Query 126142 GGAAAATAGCAGTTTTCTTAGTCTTACCTAGACCTGCAATACGATTCTGAAGAATACTTT 126201 |||||| |||||| | | | | || ||||| ||||| | |||| |||||| | Sbjct 1216 GGAAAACCGCAGTTCTGTGATTGCGGCCGAGACCAGCAATTCTGTTCTTCAGAATAGACT 1275 Query 126202 TTTGAATAAGTTTTTCTTCCCACGACGTACCTAACCCGAAGTTGATTGTCGTGAATGGTG 126261 | || || || | ||||| || || || | ||||| || || ||| || | Sbjct 1276 TCTGGATCAGACGTGACTCCCAGGATGTTCCCAGACCGAAACCGAGAGTTACGAACGGAG 1335 Query 126262 TCTGACCGTTTGAAGTCTGCATCGTATTGACTTGATATTCAAACGTCTGGAATGCATCGA 126321 |||||||||| || || |||| || || |||| |||||||| | |||||| || || Sbjct 1336 TCTGACCGTTGGAGGTATGCAGGGTGTTTACTTCATATTCAAGAGACTGGAAGGCGTCAT 1395 Query 126322 ACGTTTCCTTTTCAACACGCTTTCGTGCAAAGATAGCAGCTTTAGAATCAGAGTCGGGAT 126381 | ||||||||| ||| ||| |||||| | | | |||| || || Sbjct 1396 AGCACTCCTTTTCAGTACGGGCTCGGGCAAAGCT------GTCCGGATCA-----GGAAT 1444 Query 126382 GT---TCTTCTCGACCTACTTC-GAGCCATTTATAATATGACTTACGAACATAAGGTGCT 126437 || || |||| || |||| || | || || | | ||| |||||| || || Sbjct 1445 GTGCCACTCCTCGGCCATCTTCTGATAC-TTCATGA-AACTCTTGGTAACATACGGGGCA 1502 Query 126438 AGGACTTCGTCGATTCTATTGATCGTGTTACCGCCGTAGATATGGCTACTTACTTGCTGA 126497 || || || || | ||||| || ||||||||||||||||||| || || Sbjct 1503 AGCACCTCATCACAGCGGTTGATGGTTGTACCGCCGTAGATATGGCTGGCAACCTGGGCG 1562 Query 126498 ATAATCTGAGTTACAACAGTGGCAGCAGTGCTAATACTGTTTGGTTCTTCGATTTCAGCA 126557 || ||||| | ||| | || || || || || || ||| ||||||||| ||| Sbjct 1563 ATGATCTGTGCGGTAACCGCGGTTGCGGTACTGATTGACTTAGGTGATTCGATTTCGGCA 1622 Query 126558 TTACCCATTTTGAAGCCGCCTTCAAACATGCCTTTGATATCAATAAGCATACAGTTGAAT 126617 |||||||| ||||| |||| ||| | ||| || || ||| || |||||||||||||| Sbjct 1623 TTACCCATCTTGAAACCGCGTTCCAGCATTCCGCCGACATCGATCAGCATACAGTTGAAC 1682 Query 126618 TGCGGGAATAATGGACTGTAGTCAAGGTCATGAAAATGAATATCGCC 126664 |||||| || || ||||| || || |||||||| || || || Sbjct 1683 ATCGGGAAGAACGGTGAATAGTCGAGATCGTGAAAATGGATCTCCCC 1729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793703008129920