Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_028834.1 Length=48216 Score E Sequences producing significant alignments: (Bits) Value seq166 91.5 5e-14 seq3702 82.4 2e-11 >seq166 Length=84996 Score = 91.5 bits (100), Expect = 5e-14 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 36271 GTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT-GCCAG 36329 ||||| |||| ||||||||||| ||||||||||||||||||||||||||||| || | Sbjct 53547 GTCGGGGTACCGGGATTCGAACCCGGGACCCTCTGCTCCCAAAGCAGATGCGCTAACCGG 53606 Query 36330 ACTGCGCTACACTCCGA 36346 ||||||||||| |||| Sbjct 53607 GCTGCGCTACACCCCGA 53623 >seq3702 Length=137167 Score = 82.4 bits (90), Expect = 2e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 36271 GTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT-GCCAG 36329 ||||| ||| ||||||||||||| ||||| ||||||||||||||| |||||| ||| | Sbjct 18805 GTCGGGGTAGCAGGATTCGAACCTGCGACCCCCTGCTCCCAAAGCAGGTGCGCTAGCCGG 18746 Query 36330 ACTGCGCTACACTCCGA 36346 ||||||||| | |||| Sbjct 18745 ACTGCGCTATGCCCCGA 18729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154160264934364