Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_028840.1 Length=111751 Score E Sequences producing significant alignments: (Bits) Value seq2964 104 2e-17 >seq2964 Length=2227 Score = 104 bits (114), Expect = 2e-17 Identities = 253/381 (66%), Gaps = 2/381 (1%) Strand=Plus/Plus Query 78591 GCTAGGAATGAACGGCAGCCCATAGAAACTTTGTAGTCTCCAGTAACTTCTACAACCTTG 78650 || |||||||| ||||||||||| | | ||| | || ||||| | ||||||| Sbjct 1032 GCGAGGAATGAGCGGCAGCCCATCGGAGTCTTGAATGAACCGGTAACCTTCACAACCTGA 1091 Query 78651 TCATAGCTGATATAATCTGGATACATACGTTCAGCAGTACATTTCATAGCTAACTTCTTG 78710 || ||| | | | ||| |||||||| | | | | |||| | ||| | ||||||| Sbjct 1092 TCGTAGTTCAGAATATCCGGATACATTCTCTTGGAGGCGCATTCAAGAGCCAGCTTCTTG 1151 Query 78711 ATGTCATAATTAACATCTCCTGGTTTCATATTTACACCATCACGAAGTACAAATACCAGT 78770 || || || ||| ||| || ||| || | || || | |||| ||||| Sbjct 1152 ATATCGTAGTTAGGATCACCCTCTTTACGGTTCAGTCCCTCCTTGATGGCAAACACCAGC 1211 Query 78771 TTCGGGAAGATAGCTGTACGTTTATTGATACCTAAGCCATCCATGC-GTACTTTCAGTAT 78829 || ||||| | || || | | |||| || | ||| | || | || | ||||| || Sbjct 1212 TTAGGGAAAACCGCAGTTCTGTGATTGCGGCCGAGACCAGCAATTCTGTTC-TTCAGAAT 1270 Query 78830 TGCTTTCTGTACTAGACGTGCTTCCCAAGAAGTTCCTAGACCAAAACCAAAGGTAATAAA 78889 | ||||| | ||||||| ||||| || ||||| ||||| ||||| | || | || Sbjct 1271 AGACTTCTGGATCAGACGTGACTCCCAGGATGTTCCCAGACCGAAACCGAGAGTTACGAA 1330 Query 78890 TGGACTCTGACCATTAGAGTTGAACATGGTATTGATTTCATATTCTAAACCCTGACAAGC 78949 ||| ||||||| || ||| | || ||| || | ||||||||| | | ||| | || Sbjct 1331 CGGAGTCTGACCGTTGGAGGTATGCAGGGTGTTTACTTCATATTCAAGAGACTGGAAGGC 1390 Query 78950 GTCATAGACTTCTTTTTCAGT 78970 ||||||| || |||||||| Sbjct 1391 GTCATAGCACTCCTTTTCAGT 1411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357456184839968