Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_028879.1 Length=43225 Score E Sequences producing significant alignments: (Bits) Value seq3952 80.6 7e-11 seq1731 80.6 7e-11 seq146 80.6 7e-11 >seq3952 Length=6226 Score = 80.6 bits (88), Expect = 7e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 31268 GGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTACCGCTTGGCGACGGCGC 31327 ||||||||||| |||||||| ||||||||||| |||||||||||||||||||| || | Sbjct 413 GGATTCGAACCAGCGAATGCCAGAATCAAAATCTGGTGCCTTACCGCTTGGCGATAGCCC 472 Query 31328 AA 31329 || Sbjct 473 AA 474 >seq1731 Length=76336 Score = 80.6 bits (88), Expect = 7e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 31268 GGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTACCGCTTGGCGACGGCGC 31327 ||||||||||| |||||||| ||||||||||| |||||||||||||||||||| || | Sbjct 59457 GGATTCGAACCAGCGAATGCCAGAATCAAAATCTGGTGCCTTACCGCTTGGCGATAGCCC 59398 Query 31328 AA 31329 || Sbjct 59397 AA 59396 >seq146 Length=82680 Score = 80.6 bits (88), Expect = 7e-11 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 31251 TTTTGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTA 31310 || |||||| | ||| ||||||||||| ||||||| ||| | ||||| ||| ||||||| Sbjct 27684 TTCTGGCTGGGGCGGCTGGATTCGAACCAACGAATGTCGGCACCAAAAGCCGATGCCTTA 27743 Query 31311 CCGCTTGGCGACGGCGCAA 31329 || |||||||||| | ||| Sbjct 27744 CCACTTGGCGACGCCCCAA 27762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138190032000506