Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_029009.1 Length=147589 Score E Sequences producing significant alignments: (Bits) Value seq4630 89.7 5e-13 seq3711 84.2 2e-11 >seq4630 Length=6049 Score = 89.7 bits (98), Expect = 5e-13 Identities = 200/295 (68%), Gaps = 4/295 (1%) Strand=Plus/Minus Query 8931 GCTTTAAAATTATATACAGGTTTGACAATCTTTTGAATATCTACTGTATCTTTGATGATT 8990 ||||||||||| || || ||||| | ||| | ||| ||||| || || || | Sbjct 4200 GCTTTAAAATTGTAAACCGGTTTCATAATTTCAATAATTTCTACAGTTTCGCCAATAACG 4141 Query 8991 TCTTTGATTTCGTC-AGCATTCTTGTATGCTTTTGGTGCTTCGTCTAGTGTACTTTGAAC 9049 || | || || || ||| || ||||| |||| || | ||| || || ||| ||| | Sbjct 4140 TCAATAATATCATCAAGCGTT-TTGTAGGCTTGCGGCGATTCATCAAGCGTATTTTCATT 4082 Query 9050 AACAGATGTTGTATAGATACCAGACATTGTTTGTTTAAACTCATCTAAGTCAAGCAG-TT 9108 || || |||||||| || || | ||||| | || ||| || || ||| || | | Sbjct 4081 TACCGAAGTTGTATAAATCCCCGCCATTGAGTTTTGAAAATCTTC-AAGCGAAATTGAAT 4023 Query 9109 CTTTTGCTTTAGAACGAGACAATACACGCCCTGCTCCATGAGGTGCAGAATTATTCCAAT 9168 |||| || | || |||| || ||||||||| || || || || |||| |||||| | Sbjct 4022 CTTTGGCAGTGCCGCGTGACATTATACGCCCTGCGCCGTGCGGAGCCGAATAATTCCATT 3963 Query 9169 CAGTGTTTCCTTTTCCTACACCAATGATAGAGCCTTCTTTCATGTTTAAAGGAAT 9223 ||| |||||||| ||||| | | | ||||| || ||| |||| ||||| Sbjct 3962 CAGCATTTCCTTTACCTACCGCCAAAACCGAGCCGTCACGCATATTTATTGGAAT 3908 >seq3711 Length=63627 Score = 84.2 bits (92), Expect = 2e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 49955 CCCCTACAGGATTCGAACCTGTGACCCCCTGATTAAGAGTCAGGTGCTACCACCAACTGA 50014 ||||| ||||| | ||||||| |||||||||||||| |||||| |||| ||||||||| Sbjct 42931 CCCCTTCAGGACTTGAACCTGAGACCCCCTGATTAACAGTCAGATGCTCTAACCAACTGA 42872 Query 50015 GCTAAGGAG 50023 ||||||||| Sbjct 42871 GCTAAGGAG 42863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472126705905960