Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_029058.1 Length=106071 Score E Sequences producing significant alignments: (Bits) Value seq3891 114 9e-21 seq1870 114 9e-21 seq1869 114 9e-21 >seq3891 Length=32788 Score = 114 bits (126), Expect = 9e-21 Identities = 82/93 (88%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 30472 ACGGAGAATGAGGGATTTGAACCCTCGCACCGGTTTCCCGGCCTACACCCTTAGCAGGGG 30531 |||||||| ||||||||||||||||||| |||||| |||| ||||||||||||||||||| Sbjct 4437 ACGGAGAAGGAGGGATTTGAACCCTCGCGCCGGTTGCCCGACCTACACCCTTAGCAGGGG 4378 Query 30532 CGCCCCTTCAACCAACTTGGGTAATTCTCCAAA 30564 |||| |||| || |||| ||| ||||||||| Sbjct 4377 CGCCTCTTCGGCC-TCTTGAGTACTTCTCCAAA 4346 >seq1870 Length=2698 Score = 114 bits (126), Expect = 9e-21 Identities = 82/93 (88%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 30472 ACGGAGAATGAGGGATTTGAACCCTCGCACCGGTTTCCCGGCCTACACCCTTAGCAGGGG 30531 |||||||| ||||||||||||||||||| |||||| |||| ||||||||||||||||||| Sbjct 362 ACGGAGAAGGAGGGATTTGAACCCTCGCGCCGGTTGCCCGACCTACACCCTTAGCAGGGG 421 Query 30532 CGCCCCTTCAACCAACTTGGGTAATTCTCCAAA 30564 |||| |||| || |||| ||| ||||||||| Sbjct 422 CGCCTCTTCGGCC-TCTTGAGTACTTCTCCAAA 453 >seq1869 Length=2705 Score = 114 bits (126), Expect = 9e-21 Identities = 82/93 (88%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 30472 ACGGAGAATGAGGGATTTGAACCCTCGCACCGGTTTCCCGGCCTACACCCTTAGCAGGGG 30531 |||||||| ||||||||||||||||||| |||||| |||| ||||||||||||||||||| Sbjct 361 ACGGAGAAGGAGGGATTTGAACCCTCGCGCCGGTTGCCCGACCTACACCCTTAGCAGGGG 420 Query 30532 CGCCCCTTCAACCAACTTGGGTAATTCTCCAAA 30564 |||| |||| || |||| ||| ||||||||| Sbjct 421 CGCCTCTTCGGCC-TCTTGAGTACTTCTCCAAA 452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339281314370448