Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq2619 104 2e-17 seq4012 86.0 5e-12 >seq2619 Length=11042 Score = 104 bits (114), Expect = 2e-17 Identities = 195/287 (68%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 126075 TCCATATGATTGGAATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCACCTCA 126134 |||| ||||| ||||| | || ||||||| || || || ||||| || ||| Sbjct 2302 TCCAGGTGATTTGAATATAAGTGAACATCTCCGCCGGTCCAAACAAAATCACCAACATCA 2361 Query 126135 AGTCCACATTCTTTTGCAACAAGATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGA 126194 || | || | | || | | ||| || || | ||||||||| ||||||||||||||| Sbjct 2362 AGATCGCACTGCTGCGCCATCATATGAGTAAGAAGAGCATAACTAGCAATATTGAAAGGA 2421 Query 126195 ACACCTAAAAATATATCAGCACTTCTTTGATATAATTGACAATTTAATTTACCCTCTTGT 126254 ||||| | ||| | |||| |||| ||||| || || ||| |||||| | | Sbjct 2422 ACACCAAGAAAGACATCACAGCTTCGCTGATACAACTGGCAAGATAATTTGTTATTAACT 2481 Query 126255 ACGTAAAATTGAAACATTGTGTGGCAAGGTGGTAATGCCATTGAATCGATTTCAGTAGGA 126314 || ||||| || || | | || ||||| | ||||||||| ||| ||||| | | Sbjct 2482 ACATAAAACTGGAAAAGAGCATGACAAGGAGCTAATGCCATCTTATCAATTTCTCCGGCA 2541 Query 126315 TTCCATGCTGAAACAATGTGACGTCGAGAGTTTGGATTGGTTTTAAT 126361 ||||| |||||||| ||| |||| || | |||||| | || || Sbjct 2542 TTCCAGGCTGAAACGATGATCCGTCTGGAATCAGGATTGTTCTTTAT 2588 >seq4012 Length=43821 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 126162 GTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACCTAAAAATATATCAGCACTTCTT 126221 ||||| | |||||||| || ||||||||||| || || | ||| |||| |||||||| Sbjct 16488 GTCAGCAGCGCATAACTGGCGATATTGAAAGGCACGCCAAGAAACGTATCGGCACTTCTC 16547 Query 126222 TGATATAATTGACAATTTAATTTACCCTCTTGTACGTAAAATTGAAACATTGTGTGGCAA 126281 ||||| | || ||| | | ||| || || || ||||| || |||| | || || Sbjct 16548 TGATACAGCTGGCAACTCAGTTTTCCGTCAGCCACATAAAACTGGAACAGAATATGACAT 16607 Query 126282 GGTGGTAATGCCATTGAATCGATTTCAGTAGGATTCCATGCTGAAACAATGTGACGTCGA 126341 || || | ||| ||| || |||| ||||||||| || ||| |||||| Sbjct 16608 GGAGGCAGATTCATATTATCTATGTCAGCCACATTCCATGCACTCACGATGAGACGTCTT 16667 Query 126342 GAGTTTGGATTGGTTTTAATTTGTTGTATAAC 126373 || || ||||| || ||||| || | ||| || Sbjct 16668 GAATTCGGATTCGTCTTAATCTGGTCTATCAC 16699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408573008035493