Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq2964 104 3e-17 >seq2964 Length=2227 Score = 104 bits (114), Expect = 3e-17 Identities = 293/439 (67%), Gaps = 27/439 (6%) Strand=Plus/Minus Query 78760 ATGAAGTAAATACACTTTTCAGCTCTAATGGACAGACTCCTTTTGTAACAATTACATTTG 78819 |||||||||| || || | ||| || || |||||||| || ||||| | || | Sbjct 1371 ATGAAGTAAACACCCTGCATACCTCCAACGGTCAGACTCCGTTCGTAACTCTCGGTTTCG 1312 Query 78820 GTACGGGAACTGACTGGACTGAACGAATGATTCAGAAAGCAATTCTGAAAAATCGTATTA 78879 || |||||| |||| ||| |||| ||||| | |||||||| || | ||| Sbjct 1311 GTCTGGGAACATCCTGGGAGTCACGTCTGATCCAGAAGTCTATTCTGAAGAACAGAATTG 1252 Query 78880 AAGGTCTTGGTCGTGATGGGATAACTCCTATTTTCCCTAAGCTTGTTATGTTTGT--TGA 78937 ||||| || || || | |||| | ||||||||||||| || ||||| | | Sbjct 1251 CTGGTCTCGGCCGCAATCACAGAACTGCGGTTTTCCCTAAGCTGGT---GTTTGCCATCA 1195 Query 78938 AGAAGGTGTTAATCTTTACAAAGAC-GATCCGAACTATGATATTAAGCAGCTTGCTCTAG 78996 || ||| | | | || | || ||||| ||||| ||||| ||| |||| ||||| | Sbjct 1194 AGGAGGGACTGAACCGTAAAGAGGGTGATCCTAACTACGATATCAAGAAGCTGGCTCTTG 1135 Query 78997 AGTGCGCAAGCAAAAGAATGTATCCTGATATTATTTCAGCTAAGAACA----ATAAAGCT 79052 | ||||| ||| ||||||||||| ||||| | | | ||| || || | ||| Sbjct 1134 AATGCGCCTCCAAGAGAATGTATCCGGATAT--TCTGAACTACGATCAGGTTGTGAAG-- 1079 Query 79053 ATCACTGGTTCATCTATTCCTGTTTCTCCGATGGGATGCCG-TAGTTTCTTG-AGTGTAT 79110 | || ||||| |||| | |||||||||| ||||| | || || | |||| Sbjct 1078 GTTACCGGTTC----ATTCAAG--ACTCCGATGGGCTGCCGCTCATTCCTCGCCCCGTAT 1025 Query 79111 GGAAAGATTCGACTGGTAATGAAATTCTTGATGGACGTAATAATCTTGGTGTTGTAACAC 79170 | | || || ||| | | || | || || ||||| ||||| ||||| |||| | Sbjct 1024 G--AGGA---GAACGGTGTTCAGATCCACGACGGCCGTAACAATCTGGGTGTGGTAAGTC 970 Query 79171 TGAATCTTCCTCGTATCGC 79189 ||||||| ||||||||||| Sbjct 969 TGAATCTGCCTCGTATCGC 951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546301177909200