Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_031087.1 Length=168272 Score E Sequences producing significant alignments: (Bits) Value seq2701 86.0 7e-12 >seq2701 Length=6067 Score = 86.0 bits (94), Expect = 7e-12 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 60003 GTGAAAGTACGGGCGATAACGTCGCGCTGCTGTTCTGGTGTCAGGGAGTTAAAGCGCACC 60062 |||||||| | | | ||| || ||||||||||| || | ||||| || || || Sbjct 5353 GTGAAAGTTCTTGTTACAACATCCTGCTGCTGTTCTTTGGTTAAAGAGTTGAAACGTACA 5294 Query 60063 GCGTAGCCGGAAACACGAATGGTAAGCTGCGGGTATTTTTCCGGATGCTCAACCGCGTCC 60122 || || || |||||||| || || || || |||||||| || || || | || || Sbjct 5293 GCATAACCTGAAACACGGATTGTCAGTGTAGGATATTTTTCAGGGTGTTCCATTGCATCG 5234 Query 60123 AGCAGAGTTTCGCGACGCAGCACGTTAACGTTCAGGTGCTGACCGCCTTC 60172 ||||| ||||| | || ||||| || ||||| |||||||||||||| Sbjct 5233 AGCAGTGTTTCTCTGTTGAGAACGTTCACATTCAGATGCTGACCGCCTTC 5184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538308087401280