Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_031933.1 Length=114180 Score E Sequences producing significant alignments: (Bits) Value seq2964 102 6e-17 >seq2964 Length=2227 Score = 102 bits (112), Expect = 6e-17 Identities = 257/383 (67%), Gaps = 6/383 (2%) Strand=Plus/Minus Query 58425 ACTGAGAAAGAAGTT-TACGATGCCTGTCAGGGCCTGGAGTATGAAATCAATACGATGTT 58483 ||||| |||| ||| || || |||| ||| || || |||||| | || || || Sbjct 1411 ACTGA-AAAGGAGTGCTATGACGCCTTCCAGTCTCTTGAATATGAAGTAAACACCCTGCA 1353 Query 58484 CAACTCTAATGGTCAAAGTCCGTTTATTACCTTTGGTTTTGGTCTAGGAACTTCTTGGGA 58543 | ||| || ||||| | |||||| | || | ||||| ||||| ||||| || ||||| Sbjct 1352 TACCTCCAACGGTCAGACTCCGTTCGTAACTCTCGGTTTCGGTCTGGGAACATCCTGGGA 1293 Query 58544 AGCACGTCTTGTACAGAAAGCAATACTAGAAGTAC-GTATGGATGGTTTGGGTATCAATA 58602 ||||||| | ||||| | || || |||| || | || | |||| | || |||| Sbjct 1292 GTCACGTCTGATCCAGAAGTCTATTCT-GAAGAACAGAATTGCTGGTCTCGGCCGCAATC 1234 Query 58603 AACGTACAGCTATCTTCCCTAAACTGGTATTTGTTTTGCGTGAGGGCGTAAACATGAAAC 58662 | | || || | |||||||| ||||| |||| | ||||| | ||| ||| Sbjct 1233 ACAGAACTGCGGTTTTCCCTAAGCTGGTGTTTGCCATCAAGGAGGGACTGAACCGTAAAG 1174 Query 58663 CTGGTGATGTTAACTATGATATCAAGAAGTTAGCTATGAAATGTACTGCTGAACGTATGT 58722 |||||| |||||| |||||||||||| | ||| | |||| | | | | |||| Sbjct 1173 AGGGTGATCCTAACTACGATATCAAGAAGCTGGCTCTTGAATGCGCCTCCAAGAGAATGT 1114 Query 58723 ATCCTGACTACATCAGTTATGATAAGGTTGTAGAAGTTACGGGGGACTACAA-AGTCTCT 58781 |||| || | | || ||| ||||||| | ||||| || | ||| | || | Sbjct 1113 ATCCGGATATTCTGAACTACGATCAGGTTGTGAAGGTTACCGGTTCATTCAAGACTC-CG 1055 Query 58782 ATGGGCTGTCGTTCATTCCTGGC 58804 |||||||| || |||||||| || Sbjct 1054 ATGGGCTGCCGCTCATTCCTCGC 1032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 365228501806599