Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq24950 343 2e-89 seq23781 343 2e-89 seq39944 280 2e-70 seq66935 179 4e-40 seq34278 179 4e-40 seq61355 150 2e-31 seq60444 111 2e-19 seq69860 102 1e-16 seq66501 87.8 2e-12 >seq24950 Length=757 Score = 343 bits (380), Expect = 2e-89 Identities = 530/743 (71%), Gaps = 10/743 (1%) Strand=Plus/Plus Query 117985 GTTGGCCAGGTTGCAGGTGGAGGTGAACTCGTGGGGCTGCTGCACCACCTCGGCGCAGAG 118044 ||| || ||||| |||||||| | | || || | ||| | |||||||||||||| Sbjct 1 GTTAGCTAGGTTACAGGTGGACACGTCCGCGCCCGGGTACTGGATGACCTCGGCGCAGAG 60 Query 118045 GTTGGCGTAGCTGATGGCGTTGCCCTGGGTCTCGAACCAGTGGTGCCTGTTGATGGCGTC 118104 |||||| || ||||||| ||| |||| |||||||||| ||| |||||| Sbjct 61 GTTGGCCGAGGCGATGGCGCGGCCGCACATCTCCTTCCAGTGGTGCGCGTTACAGGCGTC 120 Query 118105 CTTGGACAGGATGTAGGGGGAGCCTGTCTTGATGATGGCGCTTATGAGCGCGAACATCAG 118164 |||| | | |||||||||||| || |||||||| ||||| | |||| | || | ||| Sbjct 121 CTTGTAGATGATGTAGGGGGACCCCGTCTTGATAATGGCATTGATGATGGAAAAGAGCAG 180 Query 118165 GGACTTGGCGGGCAGGCTGGACGA-GTACAGCCCGTGGCGCACCAGCCGCGCGTACTCCT 118223 ||||||| | || ||| | | |||| |||| | ||||||| | ||||||||| Sbjct 181 GGACTTGATGATCAC-CTGCCCCACGTACTTGCCGTCCCTGACCAGCCCCTCGTACTCCT 239 Query 118224 CGTCAAACTTGTCCCCGTACAGCCCCGCCAGG-TGCCCGCCCACCTTGGGACTGAACAGG 118282 | | ||| |||||||| || | || ||||||||| | ||| ||||||||| Sbjct 240 CATTGAACGCCTCCCCGTAGAGATGGGGGAGCCTGCCCGCCCTCTCCGGG-CTGAACAGG 298 Query 118283 TGCCACTGGGAGTCTGG-GTTCTGCTCGTAGAGCCTAAAGAACAGGCCGGGGACGCACAC 118341 | ||| || | |||| || || | | | ||||||||||| ||| | ||| | Sbjct 299 TACCAG-GGCTGGCTGGAGTCCTCCAGGCACTTGTCAAAGAACAGGCTGGGTATGCAGAG 357 Query 118342 GCCCTGAAAGATGCTCTGGCAGCGCTCGGGGTTCTCGGGCAGCTTGGCCGCCAGGAACTC 118401 ||||| ||||| |||||| | ||||||||| ||||||||| ||||||||||||| Sbjct 358 CCCCTGGTAGATGGAGGCGCAGCGGTTGGGGTTCTCCGGCAGCTTGACCGCCAGGAACTC 417 Query 118402 CTCTATCTGCTCGTGCCAGAGCTCCATGTAGGCCGCCACGCTGACGGGCCTGAGGTTCTT 118461 || ||||| |||||| | ||||||||| || |||||||| ||||||| |||||| Sbjct 418 CTGGATCTGACAGTGCCACACCTCCATGTACGCGGCCACGCTAACGGGCCGCGGGTTCTG 477 Query 118462 GTCGTTACAGAACTCCACCTGGGAGTTGATGAGCCTCAGGCAGCTCTGCACGTTCTTGCC 118521 |||||| || | || ||||||| | || ||| | ||||| |||||| |||| || Sbjct 478 GTCGTTGAAGTATTCTACCTGGGCATCTATCAGCTTGAGGCACGAGTGCACGCTCTTCCC 537 Query 118522 CCCCGAGCTAAAGTTGGTCAGGTTCATGCCCACCCCGGACTTGCTGCACAGCAGCGGGGA 118581 ||| || ||| ||||| || ||||||||| |||||| ||||||| | || Sbjct 538 CCCGTGGCCGAAGGCGGTCATGTCACAGCCCACCCCCGACTTGACAGACAGCAGGGAGGT 597 Query 118582 GAGGTCCCTGAA-CACCGCGGACAGGGTCTTGTCCTCGGTGGACATGTCAGGGTTCATGA 118640 || | |||||| || ||||| ||| || |||||| ||||| ||| ||| |||||| Sbjct 598 CAGCT-CCTGAAGCAAAGCGGAGGTGGTGTTAGCCTCGGAGGACAGGTCGGGGCTCATGA 656 Query 118641 TGAAGCAGCTGGCCAGG-TAGCTCTGCCTGAGCCCTGCCGAGCGCATGACCGGGGTGGCG 118699 |||||||||||||||| |||| || | | || || ||||||| || ||||||| | Sbjct 657 GGAAGCAGCTGGCCAGGTTAGCGTCGCGGGTG-CCGGCAGAGCGCAGGATGGGGGTGGAG 715 Query 118700 CAGCTCACCAGCTGCGAGGCCAG 118722 |||| ||| |||||| ||||| Sbjct 716 CAGCACACGAGCTGCTGTGCCAG 738 >seq23781 Length=1882226 Score = 343 bits (380), Expect = 2e-89 Identities = 552/786 (70%), Gaps = 8/786 (1%) Strand=Plus/Minus Query 145537 TAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCC 145596 ||||| ||||| ||||| || | || ||| || | |||||| || | | |||||| Sbjct 25570 TAGACAGCCATTTCCATTTTAATAGTCGGGTGAGGATTGTAGCCTTCAATCTGAAAGTCT 25511 Query 145597 TCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGC 145656 || ||| |||||||||| || ||| || | ||||| ||||| |||| || ||| Sbjct 25510 TCAGCCTTGAAGTCATCGATTGTCTCAACTTTTCAAAGGATTTTGAGCTTGGGGAAAGGC 25451 Query 145657 CGGGGG-CTC-CTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCG 145714 | || ||| ||| ||||| |||||| ||||| | ||| || ||||| | ||| | Sbjct 25450 CTTGGTTCTCGCTGA--AGCTGAGTCTTCAGTGGCTCGATGTGATTCAGGTAAATGTGTG 25393 Query 145715 CGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGT 145774 | || ||||| ||| | |||||| || |||| ||| |||||| ||| |||| ||||| Sbjct 25392 CATCTCCCAGAGTGTGTACGAAGTCACCTGGCTTCAGGTCCGTGATGTGTGCGATCATGT 25333 Query 145775 AGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGC 145834 |||| ||||||| ||||||||| || ||||||||||| ||||| |||||||| ||||| | Sbjct 25332 AGGTGAGCAGGGCGTAGCTGGCAATATTGAAGGGCACACCCAGGCCCATGTCTCCCGACC 25273 Query 145835 GCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGC 145894 ||||||| ||||||||| |||||||| | |||||||||||||||| ||| ||||| Sbjct 25272 TTTGGTACAACTGGCAGGACAGCTCCCCATTCACCACGTAGAACTGGCAGAGGGCGTGGC 25213 Query 145895 AGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCC 145954 | || || ||||||||| || || || || ||||| || |||| || || | Sbjct 25212 ATGGGGGGAGGGCCATGAGAGGGAGATCTTTTGGATTCCAAGCACACAGGATGATTCTTC 25153 Query 145955 TGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCC 146014 || | | ||||| | ||||| | |||| | || || || || || || | Sbjct 25152 TGTTGTTAGGGTTGGTTTTGATTGTGTCGATCACTTTTTGCAGTTGATCTACTCCTTGAC 25093 Query 146015 CCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGT 146074 | ||||||| | || ||| | ||||| || |||||||||||||| || | Sbjct 25092 CTGAATAATCTGAATCCATATCTTTGTATTCAGCCCCAAAATGCCTCCACTGGAAGCCAT 25033 Query 146075 AGACGGGCCCCAGGTCCCC--GGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTC 146132 | || || |||| ||||| |||| | || ||||| || | | |||||| Sbjct 25032 AAACCGGGCCCAAATCCCCTTCAGCTCTAT-TGGAGAAGCCCAAGCC-ATCCAAGAAGTC 24975 Query 146133 CCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGT 146192 |||||||||||||| ||||| || || || ||| | | || || || || | || || Sbjct 24974 TCGGGACCCGTTGGCATCCCAAATTTTCACTCCCTTGGAAGACAGTTCCTTAGCGTTGGT 24915 Query 146193 GGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGT 146252 ||| ||| |||| ||||| |||| ||| || | || || ||||||| || | ||||| Sbjct 24914 GGATCCCTTGATAAACCACAGCAACTCCTCCAAAACACCTTTCCAGAAAACACGTTTGGT 24855 Query 146253 GGTCAGCAGGGGGAACTGGCCCCGCAGGGAGTACTTGGCCTGGTCCCCGAAGACGGACAG 146312 |||||||| || || | | | |||| |||| ||||| |||||| || ||||| Sbjct 24854 TGTCAGCAGAGGAAATTCATCTCTCAGGTTGTACCGCGCCTGCATCCCGAACACCGACAG 24795 Query 146313 GGTGCC 146318 |||||| Sbjct 24794 GGTGCC 24789 >seq39944 Length=1531855 Score = 280 bits (310), Expect = 2e-70 Identities = 581/855 (68%), Gaps = 16/855 (2%) Strand=Plus/Plus Query 9506 TGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCA 9565 || |||||||| | | |||||| | || ||| || ||||| || | || | | | Sbjct 1114312 TGCTGGGCAATGTAGTGGTGGTGGTGATCCTCACAAAATACAAGAGGCTCCGTATTATGA 1114371 Query 9566 CTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCAT 9625 | ||||| | ||| | |||||||| || ||||| |||| || || | || |||||| Sbjct 1114372 CCAACATCTACCTGCTCAACTTGGCCATTTCTGATGTGCTCTTCCTAGTCACGCTGCCAT 1114431 Query 9626 TTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAAC 9685 | ||||| |||||| || | || | | || ||| |||||| | ||||||| Sbjct 1114432 TCTGGATTCACTATGTTAGG-TGGA--AAGAGTGGGTTTTTGGCCACCACATGTGTAAGT 1114488 Query 9686 TGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAA 9745 ||||| || | | ||||||| |||||||| || |||| | ||||||||| | | Sbjct 1114489 TGCTCTCCGGGCTCTATTACATGGGCTTGTACAGCGAGATCTTCTTCATCATCCTCTTGA 1114548 Query 9746 CAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC--TTTGAGGTTTAGAACAGT 9803 | ||||| ||||||| || | ||| | || || ||| || ||| | ||||| Sbjct 1114549 CCATAGACCGGTATCTGGCCATCGTCCACGCCGTGTTTGCCCTTCGAGCCC--GGACAGT 1114606 Query 9804 AACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCC 9863 || | ||| || |||||| | | | |||||| ||||||||| | ||||||| Sbjct 1114607 CACTTTTGGTATCGTTACCAGCATCTTCACCTGGGGCCTGGCAGGGCTAGCAGCCCTCCC 1114666 Query 9864 TGAATTTTTCTTTCATG-GACACCAAGATGACAATGGTAGGGTTCAGTGTGATCCTTACT 9922 ||||||||||||||||| ||| |||||| || ||| | | || |||| | Sbjct 1114667 TGAATTTTTCTTTCATGAGAC-CCAAGAGGAGGCTGGACTGACTATCTGCAGTCCTCTTT 1114725 Query 9923 ACCCAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAA 9982 ||||||||| | ||||| |||| || ||| | | | ||| ||| | Sbjct 1114726 ACCCAGAGAATAATGTAAATGCCTGGAAGCAATTCCATGCTCTGAGAATGAATATCCTGG 1114785 Query 9983 GTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGT 10042 ||||| | |||| |||||| ||||||| |||||||| | | |||||| | | |||| Sbjct 1114786 GTCTCGCTCTGCCCCTGCTCGTTATGGCCGTCTGCTATTCAGGAATTATTAAGACACTGC 1114845 Query 10043 TGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGG 10102 |||| ||||||| | || || ||||| ||||| | ||||| |||||||| ||||||| Sbjct 1114846 TGAGATGCCCCAGTAGAAAAAAATACAAAGCCATTCGACTCATTTTTGTCATTATGGTGG 1114905 Query 10103 CCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAA 10162 || ||| |||| |||||||||||||| | || ||||||| | | ||||| || Sbjct 1114906 TCTTCTTTATTTTCTGGACACCCTACAATCTGATTGTCCTACTCCTTGCTTTTCA---AA 1114962 Query 10163 --CCCTTCTTAACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAAC 10220 | ||| ||| ||| ||| |||||| | ||||| |||| ||||| | || Sbjct 1114963 TGCACTTGGAGACCGATTGTGAGCA--GAGCAGACAGCTGGACCTGGCCATGCTGGTGAC 1115020 Query 10221 AAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGA 10280 | | |||||||| ||||| || ||||||| |||||||| || || || || || Sbjct 1115021 CGAGGTGATCGCCTACACGCACTGCTGTGTCAACCCCGTGATCTATGCCTTTGTTGGTGA 1115080 Query 10281 GAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 10340 || ||| | | ||||| |||||| ||||||| | |||||||||||||| |||| Sbjct 1115081 GAGGTTCCGGAAGCACCTCCGCCACTTTTTCCACAGACATGTGGCCATCTACCTGGGCAA 1115140 Query 10341 GTACATCCCCTTCCT 10355 | ||| || || || Sbjct 1115141 ATTCATGCCATTTCT 1115155 Score = 280 bits (310), Expect = 2e-70 Identities = 581/855 (68%), Gaps = 16/855 (2%) Strand=Plus/Plus Query 176392 TGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCA 176451 || |||||||| | | |||||| | || ||| || ||||| || | || | | | Sbjct 1114312 TGCTGGGCAATGTAGTGGTGGTGGTGATCCTCACAAAATACAAGAGGCTCCGTATTATGA 1114371 Query 176452 CTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCAT 176511 | ||||| | ||| | |||||||| || ||||| |||| || || | || |||||| Sbjct 1114372 CCAACATCTACCTGCTCAACTTGGCCATTTCTGATGTGCTCTTCCTAGTCACGCTGCCAT 1114431 Query 176512 TTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAAC 176571 | ||||| |||||| || | || | | || ||| |||||| | ||||||| Sbjct 1114432 TCTGGATTCACTATGTTAGG-TGGA--AAGAGTGGGTTTTTGGCCACCACATGTGTAAGT 1114488 Query 176572 TGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAA 176631 ||||| || | | ||||||| |||||||| || |||| | ||||||||| | | Sbjct 1114489 TGCTCTCCGGGCTCTATTACATGGGCTTGTACAGCGAGATCTTCTTCATCATCCTCTTGA 1114548 Query 176632 CAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC--TTTGAGGTTTAGAACAGT 176689 | ||||| ||||||| || | ||| | || || ||| || ||| | ||||| Sbjct 1114549 CCATAGACCGGTATCTGGCCATCGTCCACGCCGTGTTTGCCCTTCGAGCCC--GGACAGT 1114606 Query 176690 AACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCC 176749 || | ||| || |||||| | | | |||||| ||||||||| | ||||||| Sbjct 1114607 CACTTTTGGTATCGTTACCAGCATCTTCACCTGGGGCCTGGCAGGGCTAGCAGCCCTCCC 1114666 Query 176750 TGAATTTTTCTTTCATG-GACACCAAGATGACAATGGTAGGGTTCAGTGTGATCCTTACT 176808 ||||||||||||||||| ||| |||||| || ||| | | || |||| | Sbjct 1114667 TGAATTTTTCTTTCATGAGAC-CCAAGAGGAGGCTGGACTGACTATCTGCAGTCCTCTTT 1114725 Query 176809 ACCCAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAA 176868 ||||||||| | ||||| |||| || ||| | | | ||| ||| | Sbjct 1114726 ACCCAGAGAATAATGTAAATGCCTGGAAGCAATTCCATGCTCTGAGAATGAATATCCTGG 1114785 Query 176869 GTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGT 176928 ||||| | |||| |||||| ||||||| |||||||| | | |||||| | | |||| Sbjct 1114786 GTCTCGCTCTGCCCCTGCTCGTTATGGCCGTCTGCTATTCAGGAATTATTAAGACACTGC 1114845 Query 176929 TGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGG 176988 |||| ||||||| | || || ||||| ||||| | ||||| |||||||| ||||||| Sbjct 1114846 TGAGATGCCCCAGTAGAAAAAAATACAAAGCCATTCGACTCATTTTTGTCATTATGGTGG 1114905 Query 176989 CCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAA 177048 || ||| |||| |||||||||||||| | || ||||||| | | ||||| || Sbjct 1114906 TCTTCTTTATTTTCTGGACACCCTACAATCTGATTGTCCTACTCCTTGCTTTTCA---AA 1114962 Query 177049 --CCCTTCTTAACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAAC 177106 | ||| ||| ||| ||| |||||| | ||||| |||| ||||| | || Sbjct 1114963 TGCACTTGGAGACCGATTGTGAGCA--GAGCAGACAGCTGGACCTGGCCATGCTGGTGAC 1115020 Query 177107 AAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGA 177166 | | |||||||| ||||| || ||||||| |||||||| || || || || || Sbjct 1115021 CGAGGTGATCGCCTACACGCACTGCTGTGTCAACCCCGTGATCTATGCCTTTGTTGGTGA 1115080 Query 177167 GAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 177226 || ||| | | ||||| |||||| ||||||| | |||||||||||||| |||| Sbjct 1115081 GAGGTTCCGGAAGCACCTCCGCCACTTTTTCCACAGACATGTGGCCATCTACCTGGGCAA 1115140 Query 177227 GTACATCCCCTTCCT 177241 | ||| || || || Sbjct 1115141 ATTCATGCCATTTCT 1115155 Score = 120 bits (132), Expect = 4e-22 Identities = 243/357 (68%), Gaps = 13/357 (4%) Strand=Plus/Plus Query 9992 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 10051 |||||||||| | ||| |||||||||| | ||| || | || ||| | || | | Sbjct 1209698 TGCCTCTGCTTGTCATGATCGTCTGCTACTCGGGAATCATAAAAACCCTGCTCCGGTGTC 1209757 Query 10052 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 10108 || | ||||||||| ||||||| | ||||||||||| || |||||| | | ||| | Sbjct 1209758 GCAACGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTCGTGATCATGATTGTCTACT 1209817 Query 10109 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTT- 10167 || | || ||| | ||||||||||| || || || ||| ||||| || | | | || Sbjct 1209818 TTCTCTTCTGGGCTCCCTACAACATCGTCCTTCTCCTGAGCACCTTCCAGGAATTCTTTG 1209877 Query 10168 --CTTA--ACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAA 10223 || | ||||| | | || ||||| | ||||| ||| ||| | | ||| | Sbjct 1209878 GCCTGAGTACCTGTA-AGAGC----AGCAGCCAGCTGGACCAGGCCATGCAGGTGACAGA 1209932 Query 10224 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 10283 || | | || ||||| ||||||||||| | |||||||| |||||||||||||| Sbjct 1209933 GACGCTGGGGATGACTCACTGCTGCATCAACCCCATCATCTACGCCTTCGTGGGGGAGAA 1209992 Query 10284 GTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 10340 ||| || || | || | ||||||| | || | |||| |||||||||| Sbjct 1209993 GTTCAGGAGGTATCTCTCTGTGTTCTTCCGAAAGCACATTGCCAAACACCTCTGCAA 1210049 Score = 120 bits (132), Expect = 4e-22 Identities = 243/357 (68%), Gaps = 13/357 (4%) Strand=Plus/Plus Query 176878 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 176937 |||||||||| | ||| |||||||||| | ||| || | || ||| | || | | Sbjct 1209698 TGCCTCTGCTTGTCATGATCGTCTGCTACTCGGGAATCATAAAAACCCTGCTCCGGTGTC 1209757 Query 176938 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 176994 || | ||||||||| ||||||| | ||||||||||| || |||||| | | ||| | Sbjct 1209758 GCAACGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTCGTGATCATGATTGTCTACT 1209817 Query 176995 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTT- 177053 || | || ||| | ||||||||||| || || || ||| ||||| || | | | || Sbjct 1209818 TTCTCTTCTGGGCTCCCTACAACATCGTCCTTCTCCTGAGCACCTTCCAGGAATTCTTTG 1209877 Query 177054 --CTTA--ACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAA 177109 || | ||||| | | || ||||| | ||||| ||| ||| | | ||| | Sbjct 1209878 GCCTGAGTACCTGTA-AGAGC----AGCAGCCAGCTGGACCAGGCCATGCAGGTGACAGA 1209932 Query 177110 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 177169 || | | || ||||| ||||||||||| | |||||||| |||||||||||||| Sbjct 1209933 GACGCTGGGGATGACTCACTGCTGCATCAACCCCATCATCTACGCCTTCGTGGGGGAGAA 1209992 Query 177170 GTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 177226 ||| || || | || | ||||||| | || | |||| |||||||||| Sbjct 1209993 GTTCAGGAGGTATCTCTCTGTGTTCTTCCGAAAGCACATTGCCAAACACCTCTGCAA 1210049 Score = 104 bits (114), Expect = 3e-17 Identities = 207/303 (68%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 9992 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 10051 |||| ||||| | ||| |||||||||| | ||| || | || ||| | | | | Sbjct 1223838 TGCCACTGCTTGTCATGATCGTCTGCTACTCGGGAATCATAAAAACCCTGCTCCAGTGTC 1223897 Query 10052 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 10108 |||| ||||||||| ||||||| | ||||||||||| || |||||| | | ||| | Sbjct 1223898 GCAGCGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTCGTGATCATGATTGTCTACT 1223957 Query 10109 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTC 10168 || | || ||| | ||||||||||| || ||||| ||| ||||| || | | ||| Sbjct 1223958 TTCTCTTCTGGGCTCCCTACAACATCGTCCTCCTCCTGAGCACCTTCCAGGAA----TTC 1224013 Query 10169 TTAACCTGCAGT--GTGCATTGAGCAGTAAC---TTGGACATGGCTCTGCTGATAACAAA 10223 || || | | |||| ||| | |||| ||||| || ||| | | ||| | Sbjct 1224014 TTTGGCTTGAATAACTGCAGTGA-CTCTAACAGGCTGGACCAAGCCATGCAGGTGACAGA 1224072 Query 10224 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 10283 || | | || ||||| |||||||| || | ||||| || |||||||||||||| Sbjct 1224073 GACCCTGGGGATGACGCACTGCTGCATCAATCCCATCATCTATGCCTTCGTGGGGGAGAA 1224132 Query 10284 GTT 10286 ||| Sbjct 1224133 GTT 1224135 Score = 104 bits (114), Expect = 3e-17 Identities = 207/303 (68%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 176878 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 176937 |||| ||||| | ||| |||||||||| | ||| || | || ||| | | | | Sbjct 1223838 TGCCACTGCTTGTCATGATCGTCTGCTACTCGGGAATCATAAAAACCCTGCTCCAGTGTC 1223897 Query 176938 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 176994 |||| ||||||||| ||||||| | ||||||||||| || |||||| | | ||| | Sbjct 1223898 GCAGCGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTCGTGATCATGATTGTCTACT 1223957 Query 176995 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTC 177054 || | || ||| | ||||||||||| || ||||| ||| ||||| || | | ||| Sbjct 1223958 TTCTCTTCTGGGCTCCCTACAACATCGTCCTCCTCCTGAGCACCTTCCAGGAA----TTC 1224013 Query 177055 TTAACCTGCAGT--GTGCATTGAGCAGTAAC---TTGGACATGGCTCTGCTGATAACAAA 177109 || || | | |||| ||| | |||| ||||| || ||| | | ||| | Sbjct 1224014 TTTGGCTTGAATAACTGCAGTGA-CTCTAACAGGCTGGACCAAGCCATGCAGGTGACAGA 1224072 Query 177110 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 177169 || | | || ||||| |||||||| || | ||||| || |||||||||||||| Sbjct 1224073 GACCCTGGGGATGACGCACTGCTGCATCAATCCCATCATCTATGCCTTCGTGGGGGAGAA 1224132 Query 177170 GTT 177172 ||| Sbjct 1224133 GTT 1224135 >seq66935 Length=8519 Score = 179 bits (198), Expect = 4e-40 Identities = 137/162 (85%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||| |||||| ||| |||| ||||||||| ||||||| ||||||||| || ||||||||| Sbjct 2438 AGGTCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATATTGAAGGGC 2497 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| |||||||| ||||| || ||||||| ||||||||| |||||||| | || Sbjct 2498 ACACCCAGGCCCATGTCTCCCGACCGTTGGTACAACTGGCAGGACAGCTCCCCATTCACC 2557 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911 |||||||||||||| ||| |||||| || || ||||||||| Sbjct 2558 ACGTAGAACTGGCAGAGGGCGTGGCATGGGGGGAGGGCCATG 2599 >seq34278 Length=4487281 Score = 179 bits (198), Expect = 4e-40 Identities = 137/162 (85%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||| |||||| ||| |||| ||||||||| ||||||| ||||||||| || ||||||||| Sbjct 3963276 AGGTCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATATTGAAGGGC 3963335 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| |||||||| ||||| || ||||||| ||||||||| |||||||| | || Sbjct 3963336 ACACCCAGGCCCATGTCTCCCGACCGTTGGTACAACTGGCAGGACAGCTCCCCATTCACC 3963395 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911 |||||||||||||| ||| |||||| || || ||||||||| Sbjct 3963396 ACGTAGAACTGGCAGAGGGCGTGGCATGGGGGGAGGGCCATG 3963437 >seq61355 Length=1802311 Score = 150 bits (166), Expect = 2e-31 Identities = 129/157 (82%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||||| ||||| || || |||||| || ||||| |||||||| |||||||| | ||| Sbjct 1273286 CAGCGCCGCAGCCGCAGCCGGAGGGTCTTCAGCTTCTCCCCCAGCGAGTTCACGTGCTCC 1273345 Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201 || ||| || | |||||||| ||||| ||||||||||||||||||||||||||| Sbjct 1273346 TTGA--TGGCAGGCCCA-TGGTTCTCAGCCTGTGGCATCACCTCCTCCAGGTAAAACTGG 1273402 Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 ||||| || |||| ||| ||||| ||||||||||||| Sbjct 1273403 ATCATTTCCGACAAGGCTTGGCAACCCAGGTAACCCT 1273439 Score = 113 bits (124), Expect = 5e-20 Identities = 82/95 (86%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981 |||||||| |||||| || |||||||||| ||||||||||| ||||||||||||||||| Sbjct 1271011 TCAGTTTTACATCTTCGTTGTCATGTAGGATTCTATGTAGTTGATGAAGATGTCAAACTC 1271070 Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 |||||||| |||||||| || | || ||||||| Sbjct 1271071 ACTCATGGCTTTGTAGACACCCCTCTCTTGGAGCT 1271105 >seq60444 Length=9403 Score = 111 bits (122), Expect = 2e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 135607 CCGCAAAAGGAGCAGTAAATCCTGCCCGTGGAGGCGCAGGTGGTGAGATACTTCTCCTTC 135666 ||||| |||||||||| |||| |||||||| | | || | || | |||||||||| Sbjct 673 CCGCAGAAGGAGCAGTTGATCCGGCCCGTGGTGCCACACACGTTGCACTGCTTCTCCTTC 732 Query 135667 TGGTCCCTGCAGTAGAAGATGTGGGTGGGGTTGAAGGAGACCTTGCTGAACTTGCCCTTG 135726 ||||| | ||||||||| | ||||||||| || ||| ||| || |||||| |||||| Sbjct 733 TGGTCTCGGCAGTAGAACACGTGGGTGGGATTAAAGTTGACTTTCAGGAACTTACCCTTG 792 Query 135727 CCCAGGTTCAGGCAGT 135742 || | ||||||||||| Sbjct 793 CCAAAGTTCAGGCAGT 808 >seq69860 Length=4000 Score = 102 bits (112), Expect = 1e-16 Identities = 111/145 (77%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 108316 AAGCTGGCGCGTGACGACCTCGAGTCCGCGGCCGTGGACGAGGCGG-TCAACGCCTTCAG 108374 ||||| ||| ||| ||| |||| || ||| |||||| ||| | |||||| || | Sbjct 372 AAGCTCCAGCGCGACAGCCTGGAGTGCGAGGCGGTGGAC-AGGTGCATCAACGAGTTTCG 430 Query 108375 GGGTCAGCTGATGCTGTCCAACGCGGACCTCATACACTACATCTACCTCTCTTTCTTTCA 108434 ||| |||||||||||||||||| |||||| | |||||||| ||||| || ||||| || Sbjct 431 GGGGCAGCTGATGCTGTCCAACCAGGACCTGGTCCACTACATATACCTGTCCTTCTTCCA 490 Query 108435 ATGTCTAAACAAGGAAAAGTTCCTC 108459 ||| | ||||| ||||||| ||| Sbjct 491 GTGTTTCAACAACCAAAAGTTTCTC 515 >seq66501 Length=3429 Score = 87.8 bits (96), Expect = 2e-12 Identities = 117/160 (73%), Gaps = 7/160 (4%) Strand=Plus/Minus Query 58542 GGCTCTCCCCGTACACAGCGACCGTGCCCCTCCTCTGGCCCATGGCACACAGGGCCACGT 58601 |||| || ||||| || || |||| ||||| |||| | |||| || ||||||| ||||| Sbjct 1000 GGCTGTCTCCGTAGACCGCCACCGAGCCCCGCCTCCGCCCCAGCGCGCACAGGGACACGT 941 Query 58602 GCTGGAAGA--TGGGGGTGTCGCCCCCCTTGGCCCCGGGCAGGGCGTCCGGGTGGATGGA 58659 ||||||||| | || | | || || | |||| | | |||| ||||| | ||| Sbjct 940 GCTGGAAGACCTCGGCGGGCTGCTCCTCGGTGCCCAG----GAGCGT-GGGGTGCACGGA 886 Query 58660 GGACAGGGAGAGCTCTGGCAGCCACGTGTGCAGCATCTCC 58699 ||| || || ||||| |||||||| | ||||| || |||| Sbjct 885 GGAGAGCGATAGCTCGGGCAGCCAGGAGTGCATCAGCTCC 846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589506490772800