Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq24950 343 2e-89
seq23781 343 2e-89
seq39944 280 2e-70
seq66935 179 4e-40
seq34278 179 4e-40
seq61355 150 2e-31
seq60444 111 2e-19
seq69860 102 1e-16
seq66501 87.8 2e-12
>seq24950
Length=757
Score = 343 bits (380), Expect = 2e-89
Identities = 530/743 (71%), Gaps = 10/743 (1%)
Strand=Plus/Plus
Query 117985 GTTGGCCAGGTTGCAGGTGGAGGTGAACTCGTGGGGCTGCTGCACCACCTCGGCGCAGAG 118044
||| || ||||| |||||||| | | || || | ||| | ||||||||||||||
Sbjct 1 GTTAGCTAGGTTACAGGTGGACACGTCCGCGCCCGGGTACTGGATGACCTCGGCGCAGAG 60
Query 118045 GTTGGCGTAGCTGATGGCGTTGCCCTGGGTCTCGAACCAGTGGTGCCTGTTGATGGCGTC 118104
|||||| || ||||||| ||| |||| |||||||||| ||| ||||||
Sbjct 61 GTTGGCCGAGGCGATGGCGCGGCCGCACATCTCCTTCCAGTGGTGCGCGTTACAGGCGTC 120
Query 118105 CTTGGACAGGATGTAGGGGGAGCCTGTCTTGATGATGGCGCTTATGAGCGCGAACATCAG 118164
|||| | | |||||||||||| || |||||||| ||||| | |||| | || | |||
Sbjct 121 CTTGTAGATGATGTAGGGGGACCCCGTCTTGATAATGGCATTGATGATGGAAAAGAGCAG 180
Query 118165 GGACTTGGCGGGCAGGCTGGACGA-GTACAGCCCGTGGCGCACCAGCCGCGCGTACTCCT 118223
||||||| | || ||| | | |||| |||| | ||||||| | |||||||||
Sbjct 181 GGACTTGATGATCAC-CTGCCCCACGTACTTGCCGTCCCTGACCAGCCCCTCGTACTCCT 239
Query 118224 CGTCAAACTTGTCCCCGTACAGCCCCGCCAGG-TGCCCGCCCACCTTGGGACTGAACAGG 118282
| | ||| |||||||| || | || ||||||||| | ||| |||||||||
Sbjct 240 CATTGAACGCCTCCCCGTAGAGATGGGGGAGCCTGCCCGCCCTCTCCGGG-CTGAACAGG 298
Query 118283 TGCCACTGGGAGTCTGG-GTTCTGCTCGTAGAGCCTAAAGAACAGGCCGGGGACGCACAC 118341
| ||| || | |||| || || | | | ||||||||||| ||| | ||| |
Sbjct 299 TACCAG-GGCTGGCTGGAGTCCTCCAGGCACTTGTCAAAGAACAGGCTGGGTATGCAGAG 357
Query 118342 GCCCTGAAAGATGCTCTGGCAGCGCTCGGGGTTCTCGGGCAGCTTGGCCGCCAGGAACTC 118401
||||| ||||| |||||| | ||||||||| ||||||||| |||||||||||||
Sbjct 358 CCCCTGGTAGATGGAGGCGCAGCGGTTGGGGTTCTCCGGCAGCTTGACCGCCAGGAACTC 417
Query 118402 CTCTATCTGCTCGTGCCAGAGCTCCATGTAGGCCGCCACGCTGACGGGCCTGAGGTTCTT 118461
|| ||||| |||||| | ||||||||| || |||||||| ||||||| ||||||
Sbjct 418 CTGGATCTGACAGTGCCACACCTCCATGTACGCGGCCACGCTAACGGGCCGCGGGTTCTG 477
Query 118462 GTCGTTACAGAACTCCACCTGGGAGTTGATGAGCCTCAGGCAGCTCTGCACGTTCTTGCC 118521
|||||| || | || ||||||| | || ||| | ||||| |||||| |||| ||
Sbjct 478 GTCGTTGAAGTATTCTACCTGGGCATCTATCAGCTTGAGGCACGAGTGCACGCTCTTCCC 537
Query 118522 CCCCGAGCTAAAGTTGGTCAGGTTCATGCCCACCCCGGACTTGCTGCACAGCAGCGGGGA 118581
||| || ||| ||||| || ||||||||| |||||| ||||||| | ||
Sbjct 538 CCCGTGGCCGAAGGCGGTCATGTCACAGCCCACCCCCGACTTGACAGACAGCAGGGAGGT 597
Query 118582 GAGGTCCCTGAA-CACCGCGGACAGGGTCTTGTCCTCGGTGGACATGTCAGGGTTCATGA 118640
|| | |||||| || ||||| ||| || |||||| ||||| ||| ||| ||||||
Sbjct 598 CAGCT-CCTGAAGCAAAGCGGAGGTGGTGTTAGCCTCGGAGGACAGGTCGGGGCTCATGA 656
Query 118641 TGAAGCAGCTGGCCAGG-TAGCTCTGCCTGAGCCCTGCCGAGCGCATGACCGGGGTGGCG 118699
|||||||||||||||| |||| || | | || || ||||||| || ||||||| |
Sbjct 657 GGAAGCAGCTGGCCAGGTTAGCGTCGCGGGTG-CCGGCAGAGCGCAGGATGGGGGTGGAG 715
Query 118700 CAGCTCACCAGCTGCGAGGCCAG 118722
|||| ||| |||||| |||||
Sbjct 716 CAGCACACGAGCTGCTGTGCCAG 738
>seq23781
Length=1882226
Score = 343 bits (380), Expect = 2e-89
Identities = 552/786 (70%), Gaps = 8/786 (1%)
Strand=Plus/Minus
Query 145537 TAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCC 145596
||||| ||||| ||||| || | || ||| || | |||||| || | | ||||||
Sbjct 25570 TAGACAGCCATTTCCATTTTAATAGTCGGGTGAGGATTGTAGCCTTCAATCTGAAAGTCT 25511
Query 145597 TCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGC 145656
|| ||| |||||||||| || ||| || | ||||| ||||| |||| || |||
Sbjct 25510 TCAGCCTTGAAGTCATCGATTGTCTCAACTTTTCAAAGGATTTTGAGCTTGGGGAAAGGC 25451
Query 145657 CGGGGG-CTC-CTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCG 145714
| || ||| ||| ||||| |||||| ||||| | ||| || ||||| | ||| |
Sbjct 25450 CTTGGTTCTCGCTGA--AGCTGAGTCTTCAGTGGCTCGATGTGATTCAGGTAAATGTGTG 25393
Query 145715 CGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGT 145774
| || ||||| ||| | |||||| || |||| ||| |||||| ||| |||| |||||
Sbjct 25392 CATCTCCCAGAGTGTGTACGAAGTCACCTGGCTTCAGGTCCGTGATGTGTGCGATCATGT 25333
Query 145775 AGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGC 145834
|||| ||||||| ||||||||| || ||||||||||| ||||| |||||||| ||||| |
Sbjct 25332 AGGTGAGCAGGGCGTAGCTGGCAATATTGAAGGGCACACCCAGGCCCATGTCTCCCGACC 25273
Query 145835 GCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGC 145894
||||||| ||||||||| |||||||| | |||||||||||||||| ||| |||||
Sbjct 25272 TTTGGTACAACTGGCAGGACAGCTCCCCATTCACCACGTAGAACTGGCAGAGGGCGTGGC 25213
Query 145895 AGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCC 145954
| || || ||||||||| || || || || ||||| || |||| || || |
Sbjct 25212 ATGGGGGGAGGGCCATGAGAGGGAGATCTTTTGGATTCCAAGCACACAGGATGATTCTTC 25153
Query 145955 TGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCC 146014
|| | | ||||| | ||||| | |||| | || || || || || || |
Sbjct 25152 TGTTGTTAGGGTTGGTTTTGATTGTGTCGATCACTTTTTGCAGTTGATCTACTCCTTGAC 25093
Query 146015 CCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGT 146074
| ||||||| | || ||| | ||||| || |||||||||||||| || |
Sbjct 25092 CTGAATAATCTGAATCCATATCTTTGTATTCAGCCCCAAAATGCCTCCACTGGAAGCCAT 25033
Query 146075 AGACGGGCCCCAGGTCCCC--GGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTC 146132
| || || |||| ||||| |||| | || ||||| || | | ||||||
Sbjct 25032 AAACCGGGCCCAAATCCCCTTCAGCTCTAT-TGGAGAAGCCCAAGCC-ATCCAAGAAGTC 24975
Query 146133 CCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGT 146192
|||||||||||||| ||||| || || || ||| | | || || || || | || ||
Sbjct 24974 TCGGGACCCGTTGGCATCCCAAATTTTCACTCCCTTGGAAGACAGTTCCTTAGCGTTGGT 24915
Query 146193 GGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGT 146252
||| ||| |||| ||||| |||| ||| || | || || ||||||| || | |||||
Sbjct 24914 GGATCCCTTGATAAACCACAGCAACTCCTCCAAAACACCTTTCCAGAAAACACGTTTGGT 24855
Query 146253 GGTCAGCAGGGGGAACTGGCCCCGCAGGGAGTACTTGGCCTGGTCCCCGAAGACGGACAG 146312
|||||||| || || | | | |||| |||| ||||| |||||| || |||||
Sbjct 24854 TGTCAGCAGAGGAAATTCATCTCTCAGGTTGTACCGCGCCTGCATCCCGAACACCGACAG 24795
Query 146313 GGTGCC 146318
||||||
Sbjct 24794 GGTGCC 24789
>seq39944
Length=1531855
Score = 280 bits (310), Expect = 2e-70
Identities = 581/855 (68%), Gaps = 16/855 (2%)
Strand=Plus/Plus
Query 9506 TGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCA 9565
|| |||||||| | | |||||| | || ||| || ||||| || | || | | |
Sbjct 1114312 TGCTGGGCAATGTAGTGGTGGTGGTGATCCTCACAAAATACAAGAGGCTCCGTATTATGA 1114371
Query 9566 CTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCAT 9625
| ||||| | ||| | |||||||| || ||||| |||| || || | || ||||||
Sbjct 1114372 CCAACATCTACCTGCTCAACTTGGCCATTTCTGATGTGCTCTTCCTAGTCACGCTGCCAT 1114431
Query 9626 TTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAAC 9685
| ||||| |||||| || | || | | || ||| |||||| | |||||||
Sbjct 1114432 TCTGGATTCACTATGTTAGG-TGGA--AAGAGTGGGTTTTTGGCCACCACATGTGTAAGT 1114488
Query 9686 TGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAA 9745
||||| || | | ||||||| |||||||| || |||| | ||||||||| | |
Sbjct 1114489 TGCTCTCCGGGCTCTATTACATGGGCTTGTACAGCGAGATCTTCTTCATCATCCTCTTGA 1114548
Query 9746 CAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC--TTTGAGGTTTAGAACAGT 9803
| ||||| ||||||| || | ||| | || || ||| || ||| | |||||
Sbjct 1114549 CCATAGACCGGTATCTGGCCATCGTCCACGCCGTGTTTGCCCTTCGAGCCC--GGACAGT 1114606
Query 9804 AACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCC 9863
|| | ||| || |||||| | | | |||||| ||||||||| | |||||||
Sbjct 1114607 CACTTTTGGTATCGTTACCAGCATCTTCACCTGGGGCCTGGCAGGGCTAGCAGCCCTCCC 1114666
Query 9864 TGAATTTTTCTTTCATG-GACACCAAGATGACAATGGTAGGGTTCAGTGTGATCCTTACT 9922
||||||||||||||||| ||| |||||| || ||| | | || |||| |
Sbjct 1114667 TGAATTTTTCTTTCATGAGAC-CCAAGAGGAGGCTGGACTGACTATCTGCAGTCCTCTTT 1114725
Query 9923 ACCCAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAA 9982
||||||||| | ||||| |||| || ||| | | | ||| ||| |
Sbjct 1114726 ACCCAGAGAATAATGTAAATGCCTGGAAGCAATTCCATGCTCTGAGAATGAATATCCTGG 1114785
Query 9983 GTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGT 10042
||||| | |||| |||||| ||||||| |||||||| | | |||||| | | ||||
Sbjct 1114786 GTCTCGCTCTGCCCCTGCTCGTTATGGCCGTCTGCTATTCAGGAATTATTAAGACACTGC 1114845
Query 10043 TGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGG 10102
|||| ||||||| | || || ||||| ||||| | ||||| |||||||| |||||||
Sbjct 1114846 TGAGATGCCCCAGTAGAAAAAAATACAAAGCCATTCGACTCATTTTTGTCATTATGGTGG 1114905
Query 10103 CCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAA 10162
|| ||| |||| |||||||||||||| | || ||||||| | | ||||| ||
Sbjct 1114906 TCTTCTTTATTTTCTGGACACCCTACAATCTGATTGTCCTACTCCTTGCTTTTCA---AA 1114962
Query 10163 --CCCTTCTTAACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAAC 10220
| ||| ||| ||| ||| |||||| | ||||| |||| ||||| | ||
Sbjct 1114963 TGCACTTGGAGACCGATTGTGAGCA--GAGCAGACAGCTGGACCTGGCCATGCTGGTGAC 1115020
Query 10221 AAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGA 10280
| | |||||||| ||||| || ||||||| |||||||| || || || || ||
Sbjct 1115021 CGAGGTGATCGCCTACACGCACTGCTGTGTCAACCCCGTGATCTATGCCTTTGTTGGTGA 1115080
Query 10281 GAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 10340
|| ||| | | ||||| |||||| ||||||| | |||||||||||||| ||||
Sbjct 1115081 GAGGTTCCGGAAGCACCTCCGCCACTTTTTCCACAGACATGTGGCCATCTACCTGGGCAA 1115140
Query 10341 GTACATCCCCTTCCT 10355
| ||| || || ||
Sbjct 1115141 ATTCATGCCATTTCT 1115155
Score = 280 bits (310), Expect = 2e-70
Identities = 581/855 (68%), Gaps = 16/855 (2%)
Strand=Plus/Plus
Query 176392 TGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCA 176451
|| |||||||| | | |||||| | || ||| || ||||| || | || | | |
Sbjct 1114312 TGCTGGGCAATGTAGTGGTGGTGGTGATCCTCACAAAATACAAGAGGCTCCGTATTATGA 1114371
Query 176452 CTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCAT 176511
| ||||| | ||| | |||||||| || ||||| |||| || || | || ||||||
Sbjct 1114372 CCAACATCTACCTGCTCAACTTGGCCATTTCTGATGTGCTCTTCCTAGTCACGCTGCCAT 1114431
Query 176512 TTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAAC 176571
| ||||| |||||| || | || | | || ||| |||||| | |||||||
Sbjct 1114432 TCTGGATTCACTATGTTAGG-TGGA--AAGAGTGGGTTTTTGGCCACCACATGTGTAAGT 1114488
Query 176572 TGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAA 176631
||||| || | | ||||||| |||||||| || |||| | ||||||||| | |
Sbjct 1114489 TGCTCTCCGGGCTCTATTACATGGGCTTGTACAGCGAGATCTTCTTCATCATCCTCTTGA 1114548
Query 176632 CAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC--TTTGAGGTTTAGAACAGT 176689
| ||||| ||||||| || | ||| | || || ||| || ||| | |||||
Sbjct 1114549 CCATAGACCGGTATCTGGCCATCGTCCACGCCGTGTTTGCCCTTCGAGCCC--GGACAGT 1114606
Query 176690 AACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCC 176749
|| | ||| || |||||| | | | |||||| ||||||||| | |||||||
Sbjct 1114607 CACTTTTGGTATCGTTACCAGCATCTTCACCTGGGGCCTGGCAGGGCTAGCAGCCCTCCC 1114666
Query 176750 TGAATTTTTCTTTCATG-GACACCAAGATGACAATGGTAGGGTTCAGTGTGATCCTTACT 176808
||||||||||||||||| ||| |||||| || ||| | | || |||| |
Sbjct 1114667 TGAATTTTTCTTTCATGAGAC-CCAAGAGGAGGCTGGACTGACTATCTGCAGTCCTCTTT 1114725
Query 176809 ACCCAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAA 176868
||||||||| | ||||| |||| || ||| | | | ||| ||| |
Sbjct 1114726 ACCCAGAGAATAATGTAAATGCCTGGAAGCAATTCCATGCTCTGAGAATGAATATCCTGG 1114785
Query 176869 GTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGT 176928
||||| | |||| |||||| ||||||| |||||||| | | |||||| | | ||||
Sbjct 1114786 GTCTCGCTCTGCCCCTGCTCGTTATGGCCGTCTGCTATTCAGGAATTATTAAGACACTGC 1114845
Query 176929 TGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGG 176988
|||| ||||||| | || || ||||| ||||| | ||||| |||||||| |||||||
Sbjct 1114846 TGAGATGCCCCAGTAGAAAAAAATACAAAGCCATTCGACTCATTTTTGTCATTATGGTGG 1114905
Query 176989 CCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAA 177048
|| ||| |||| |||||||||||||| | || ||||||| | | ||||| ||
Sbjct 1114906 TCTTCTTTATTTTCTGGACACCCTACAATCTGATTGTCCTACTCCTTGCTTTTCA---AA 1114962
Query 177049 --CCCTTCTTAACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAAC 177106
| ||| ||| ||| ||| |||||| | ||||| |||| ||||| | ||
Sbjct 1114963 TGCACTTGGAGACCGATTGTGAGCA--GAGCAGACAGCTGGACCTGGCCATGCTGGTGAC 1115020
Query 177107 AAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGA 177166
| | |||||||| ||||| || ||||||| |||||||| || || || || ||
Sbjct 1115021 CGAGGTGATCGCCTACACGCACTGCTGTGTCAACCCCGTGATCTATGCCTTTGTTGGTGA 1115080
Query 177167 GAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 177226
|| ||| | | ||||| |||||| ||||||| | |||||||||||||| ||||
Sbjct 1115081 GAGGTTCCGGAAGCACCTCCGCCACTTTTTCCACAGACATGTGGCCATCTACCTGGGCAA 1115140
Query 177227 GTACATCCCCTTCCT 177241
| ||| || || ||
Sbjct 1115141 ATTCATGCCATTTCT 1115155
Score = 120 bits (132), Expect = 4e-22
Identities = 243/357 (68%), Gaps = 13/357 (4%)
Strand=Plus/Plus
Query 9992 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 10051
|||||||||| | ||| |||||||||| | ||| || | || ||| | || | |
Sbjct 1209698 TGCCTCTGCTTGTCATGATCGTCTGCTACTCGGGAATCATAAAAACCCTGCTCCGGTGTC 1209757
Query 10052 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 10108
|| | ||||||||| ||||||| | ||||||||||| || |||||| | | ||| |
Sbjct 1209758 GCAACGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTCGTGATCATGATTGTCTACT 1209817
Query 10109 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTT- 10167
|| | || ||| | ||||||||||| || || || ||| ||||| || | | | ||
Sbjct 1209818 TTCTCTTCTGGGCTCCCTACAACATCGTCCTTCTCCTGAGCACCTTCCAGGAATTCTTTG 1209877
Query 10168 --CTTA--ACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAA 10223
|| | ||||| | | || ||||| | ||||| ||| ||| | | ||| |
Sbjct 1209878 GCCTGAGTACCTGTA-AGAGC----AGCAGCCAGCTGGACCAGGCCATGCAGGTGACAGA 1209932
Query 10224 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 10283
|| | | || ||||| ||||||||||| | |||||||| ||||||||||||||
Sbjct 1209933 GACGCTGGGGATGACTCACTGCTGCATCAACCCCATCATCTACGCCTTCGTGGGGGAGAA 1209992
Query 10284 GTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 10340
||| || || | || | ||||||| | || | |||| ||||||||||
Sbjct 1209993 GTTCAGGAGGTATCTCTCTGTGTTCTTCCGAAAGCACATTGCCAAACACCTCTGCAA 1210049
Score = 120 bits (132), Expect = 4e-22
Identities = 243/357 (68%), Gaps = 13/357 (4%)
Strand=Plus/Plus
Query 176878 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 176937
|||||||||| | ||| |||||||||| | ||| || | || ||| | || | |
Sbjct 1209698 TGCCTCTGCTTGTCATGATCGTCTGCTACTCGGGAATCATAAAAACCCTGCTCCGGTGTC 1209757
Query 176938 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 176994
|| | ||||||||| ||||||| | ||||||||||| || |||||| | | ||| |
Sbjct 1209758 GCAACGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTCGTGATCATGATTGTCTACT 1209817
Query 176995 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTT- 177053
|| | || ||| | ||||||||||| || || || ||| ||||| || | | | ||
Sbjct 1209818 TTCTCTTCTGGGCTCCCTACAACATCGTCCTTCTCCTGAGCACCTTCCAGGAATTCTTTG 1209877
Query 177054 --CTTA--ACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAA 177109
|| | ||||| | | || ||||| | ||||| ||| ||| | | ||| |
Sbjct 1209878 GCCTGAGTACCTGTA-AGAGC----AGCAGCCAGCTGGACCAGGCCATGCAGGTGACAGA 1209932
Query 177110 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 177169
|| | | || ||||| ||||||||||| | |||||||| ||||||||||||||
Sbjct 1209933 GACGCTGGGGATGACTCACTGCTGCATCAACCCCATCATCTACGCCTTCGTGGGGGAGAA 1209992
Query 177170 GTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 177226
||| || || | || | ||||||| | || | |||| ||||||||||
Sbjct 1209993 GTTCAGGAGGTATCTCTCTGTGTTCTTCCGAAAGCACATTGCCAAACACCTCTGCAA 1210049
Score = 104 bits (114), Expect = 3e-17
Identities = 207/303 (68%), Gaps = 13/303 (4%)
Strand=Plus/Plus
Query 9992 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 10051
|||| ||||| | ||| |||||||||| | ||| || | || ||| | | | |
Sbjct 1223838 TGCCACTGCTTGTCATGATCGTCTGCTACTCGGGAATCATAAAAACCCTGCTCCAGTGTC 1223897
Query 10052 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 10108
|||| ||||||||| ||||||| | ||||||||||| || |||||| | | ||| |
Sbjct 1223898 GCAGCGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTCGTGATCATGATTGTCTACT 1223957
Query 10109 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTC 10168
|| | || ||| | ||||||||||| || ||||| ||| ||||| || | | |||
Sbjct 1223958 TTCTCTTCTGGGCTCCCTACAACATCGTCCTCCTCCTGAGCACCTTCCAGGAA----TTC 1224013
Query 10169 TTAACCTGCAGT--GTGCATTGAGCAGTAAC---TTGGACATGGCTCTGCTGATAACAAA 10223
|| || | | |||| ||| | |||| ||||| || ||| | | ||| |
Sbjct 1224014 TTTGGCTTGAATAACTGCAGTGA-CTCTAACAGGCTGGACCAAGCCATGCAGGTGACAGA 1224072
Query 10224 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 10283
|| | | || ||||| |||||||| || | ||||| || ||||||||||||||
Sbjct 1224073 GACCCTGGGGATGACGCACTGCTGCATCAATCCCATCATCTATGCCTTCGTGGGGGAGAA 1224132
Query 10284 GTT 10286
|||
Sbjct 1224133 GTT 1224135
Score = 104 bits (114), Expect = 3e-17
Identities = 207/303 (68%), Gaps = 13/303 (4%)
Strand=Plus/Plus
Query 176878 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 176937
|||| ||||| | ||| |||||||||| | ||| || | || ||| | | | |
Sbjct 1223838 TGCCACTGCTTGTCATGATCGTCTGCTACTCGGGAATCATAAAAACCCTGCTCCAGTGTC 1223897
Query 176938 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 176994
|||| ||||||||| ||||||| | ||||||||||| || |||||| | | ||| |
Sbjct 1223898 GCAGCGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTCGTGATCATGATTGTCTACT 1223957
Query 176995 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTC 177054
|| | || ||| | ||||||||||| || ||||| ||| ||||| || | | |||
Sbjct 1223958 TTCTCTTCTGGGCTCCCTACAACATCGTCCTCCTCCTGAGCACCTTCCAGGAA----TTC 1224013
Query 177055 TTAACCTGCAGT--GTGCATTGAGCAGTAAC---TTGGACATGGCTCTGCTGATAACAAA 177109
|| || | | |||| ||| | |||| ||||| || ||| | | ||| |
Sbjct 1224014 TTTGGCTTGAATAACTGCAGTGA-CTCTAACAGGCTGGACCAAGCCATGCAGGTGACAGA 1224072
Query 177110 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 177169
|| | | || ||||| |||||||| || | ||||| || ||||||||||||||
Sbjct 1224073 GACCCTGGGGATGACGCACTGCTGCATCAATCCCATCATCTATGCCTTCGTGGGGGAGAA 1224132
Query 177170 GTT 177172
|||
Sbjct 1224133 GTT 1224135
>seq66935
Length=8519
Score = 179 bits (198), Expect = 4e-40
Identities = 137/162 (85%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809
||| |||||| ||| |||| ||||||||| ||||||| ||||||||| || |||||||||
Sbjct 2438 AGGTCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATATTGAAGGGC 2497
Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869
|| ||||| |||||||| ||||| || ||||||| ||||||||| |||||||| | ||
Sbjct 2498 ACACCCAGGCCCATGTCTCCCGACCGTTGGTACAACTGGCAGGACAGCTCCCCATTCACC 2557
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911
|||||||||||||| ||| |||||| || || |||||||||
Sbjct 2558 ACGTAGAACTGGCAGAGGGCGTGGCATGGGGGGAGGGCCATG 2599
>seq34278
Length=4487281
Score = 179 bits (198), Expect = 4e-40
Identities = 137/162 (85%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809
||| |||||| ||| |||| ||||||||| ||||||| ||||||||| || |||||||||
Sbjct 3963276 AGGTCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATATTGAAGGGC 3963335
Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869
|| ||||| |||||||| ||||| || ||||||| ||||||||| |||||||| | ||
Sbjct 3963336 ACACCCAGGCCCATGTCTCCCGACCGTTGGTACAACTGGCAGGACAGCTCCCCATTCACC 3963395
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911
|||||||||||||| ||| |||||| || || |||||||||
Sbjct 3963396 ACGTAGAACTGGCAGAGGGCGTGGCATGGGGGGAGGGCCATG 3963437
>seq61355
Length=1802311
Score = 150 bits (166), Expect = 2e-31
Identities = 129/157 (82%), Gaps = 3/157 (2%)
Strand=Plus/Plus
Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141
||||||| ||||| || || |||||| || ||||| |||||||| |||||||| | |||
Sbjct 1273286 CAGCGCCGCAGCCGCAGCCGGAGGGTCTTCAGCTTCTCCCCCAGCGAGTTCACGTGCTCC 1273345
Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201
|| ||| || | |||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1273346 TTGA--TGGCAGGCCCA-TGGTTCTCAGCCTGTGGCATCACCTCCTCCAGGTAAAACTGG 1273402
Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238
||||| || |||| ||| ||||| |||||||||||||
Sbjct 1273403 ATCATTTCCGACAAGGCTTGGCAACCCAGGTAACCCT 1273439
Score = 113 bits (124), Expect = 5e-20
Identities = 82/95 (86%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981
|||||||| |||||| || |||||||||| ||||||||||| |||||||||||||||||
Sbjct 1271011 TCAGTTTTACATCTTCGTTGTCATGTAGGATTCTATGTAGTTGATGAAGATGTCAAACTC 1271070
Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016
|||||||| |||||||| || | || |||||||
Sbjct 1271071 ACTCATGGCTTTGTAGACACCCCTCTCTTGGAGCT 1271105
>seq60444
Length=9403
Score = 111 bits (122), Expect = 2e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 135607 CCGCAAAAGGAGCAGTAAATCCTGCCCGTGGAGGCGCAGGTGGTGAGATACTTCTCCTTC 135666
||||| |||||||||| |||| |||||||| | | || | || | ||||||||||
Sbjct 673 CCGCAGAAGGAGCAGTTGATCCGGCCCGTGGTGCCACACACGTTGCACTGCTTCTCCTTC 732
Query 135667 TGGTCCCTGCAGTAGAAGATGTGGGTGGGGTTGAAGGAGACCTTGCTGAACTTGCCCTTG 135726
||||| | ||||||||| | ||||||||| || ||| ||| || |||||| ||||||
Sbjct 733 TGGTCTCGGCAGTAGAACACGTGGGTGGGATTAAAGTTGACTTTCAGGAACTTACCCTTG 792
Query 135727 CCCAGGTTCAGGCAGT 135742
|| | |||||||||||
Sbjct 793 CCAAAGTTCAGGCAGT 808
>seq69860
Length=4000
Score = 102 bits (112), Expect = 1e-16
Identities = 111/145 (77%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 108316 AAGCTGGCGCGTGACGACCTCGAGTCCGCGGCCGTGGACGAGGCGG-TCAACGCCTTCAG 108374
||||| ||| ||| ||| |||| || ||| |||||| ||| | |||||| || |
Sbjct 372 AAGCTCCAGCGCGACAGCCTGGAGTGCGAGGCGGTGGAC-AGGTGCATCAACGAGTTTCG 430
Query 108375 GGGTCAGCTGATGCTGTCCAACGCGGACCTCATACACTACATCTACCTCTCTTTCTTTCA 108434
||| |||||||||||||||||| |||||| | |||||||| ||||| || ||||| ||
Sbjct 431 GGGGCAGCTGATGCTGTCCAACCAGGACCTGGTCCACTACATATACCTGTCCTTCTTCCA 490
Query 108435 ATGTCTAAACAAGGAAAAGTTCCTC 108459
||| | ||||| ||||||| |||
Sbjct 491 GTGTTTCAACAACCAAAAGTTTCTC 515
>seq66501
Length=3429
Score = 87.8 bits (96), Expect = 2e-12
Identities = 117/160 (73%), Gaps = 7/160 (4%)
Strand=Plus/Minus
Query 58542 GGCTCTCCCCGTACACAGCGACCGTGCCCCTCCTCTGGCCCATGGCACACAGGGCCACGT 58601
|||| || ||||| || || |||| ||||| |||| | |||| || ||||||| |||||
Sbjct 1000 GGCTGTCTCCGTAGACCGCCACCGAGCCCCGCCTCCGCCCCAGCGCGCACAGGGACACGT 941
Query 58602 GCTGGAAGA--TGGGGGTGTCGCCCCCCTTGGCCCCGGGCAGGGCGTCCGGGTGGATGGA 58659
||||||||| | || | | || || | |||| | | |||| ||||| | |||
Sbjct 940 GCTGGAAGACCTCGGCGGGCTGCTCCTCGGTGCCCAG----GAGCGT-GGGGTGCACGGA 886
Query 58660 GGACAGGGAGAGCTCTGGCAGCCACGTGTGCAGCATCTCC 58699
||| || || ||||| |||||||| | ||||| || ||||
Sbjct 885 GGAGAGCGATAGCTCGGGCAGCCAGGAGTGCATCAGCTCC 846
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589506490772800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |