Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq23781 228 6e-55
>seq23781
Length=1882226
Score = 228 bits (252), Expect = 6e-55
Identities = 519/773 (67%), Gaps = 6/773 (1%)
Strand=Plus/Minus
Query 96898 TAAACAGCCATGGGCATTTTTATGCTAGGGTAAGGGTTATAGTTTTCCAGAATAATGTCA 96957
|| |||||||| |||||| || | |||| ||| || ||| ||| | || |||
Sbjct 25570 TAGACAGCCATTTCCATTTTAATAGTCGGGTGAGGATTGTAGCCTTCAATCTGAAAGTCT 25511
Query 96958 TTTGCTTTAAAATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGC 97017
| || || || ||||| || | ||| |||| | || || | |||||||||
Sbjct 25510 TCAGCCTTGAAGTCATCGATTGTCTCAACTTTTCAAAGGATTTTGAGCTTGGGGAAAGGC 25451
Query 97018 CTGGGAGTTCGCGTAAGCTGC-TCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGC 97076
|| || |||| |||||| ||| | || | || |||||||||| |||||||| ||
Sbjct 25450 CTTGGTTCTCGCTGAAGCTGAGTCT-TCAGTGGCTCGATGTGATTCAGGTAAATGTGTGC 25392
Query 97077 ATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACA 97136
|||||| | |||||| | || || || || | || |||| || |||||||| |
Sbjct 25391 ATCTCCCAGAGTGTGTACGAAGTCACCTGGCTTCAGGTCCGTGATGTGTGCGATCATGTA 25332
Query 97137 AGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCT 97196
|| | || | ||||| ||||| || || ||||| || || ||||| || | || ||
Sbjct 25331 GGTGAGCAGGGCGTAGCTGGCAATATTGAAGGGCACACCCAGGCCCATGTCTCCCGACCT 25272
Query 97197 TTGATATAACTGACAGGAAAGCTTTCCAT-CACACACATAAAACTGACTCAATACATGAC 97255
||| || ||||| ||||| |||| |||| ||| ||| || ||||| | | | || |
Sbjct 25271 TTGGTACAACTGGCAGGACAGCTCCCCATTCAC-CACGTAGAACTGGCAGAGGGCGTGGC 25213
Query 97256 AGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTC 97315
| ||||| | ||||| || | |||| |||||||||||||| | |||||||
Sbjct 25212 ATGGGGGGAGGGCCATGAGAGGGAGATCTTTTGGATTCCAAGCACACAGGATGATTCTTC 25153
Query 97316 TATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTC 97375
| | | | ||||| || | || || | || | | | | |||||| || |||| |
Sbjct 25152 TGTTGTTAGGGTTGGTTTTGATTGTGTCGATCACTTTTTGCAGTTGATCTACTCCTTGAC 25093
Query 97376 CACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCAT 97435
| ||||| | | | ||| ||||| || |||||||||||||| ||||| ||||
Sbjct 25092 CTGAATAATCTGAATCCATATCTTTGTATTCAGCCCCAAAATGCCTCCACTGGAAGCCAT 25033
Query 97436 AAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAA-ACCAAGCTTATCTAAATAGGAC 97494
|||| || || | || ||||| |||||| |||| |||||| ||| || ||
Sbjct 25032 AAACCGGGCCCAAATCCCCTTCAGCTCTATTGGAGAAGCCCAAGC-CATCCAAGAAGTCT 24974
Query 97495 CTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTTGCTGTCAGTA 97554
| || || || ||||||||||| | ||| || | | || || || || ||
Sbjct 24973 CGGGACCCGTTGGCATCCCAAATTTTCACTCCCTTGGAAGACAGTTCCTTAGCGTTGGTG 24914
Query 97555 GATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTT 97614
||||| |||||||||||| ||| || |||| ||||||| |||| || || | || |||
Sbjct 24913 GATCCCTTGATAAACCACAGCAACTCCTCCAAAACACCTTTCCAGAAAACACGTTTGGTT 24854
Query 97615 GTTAAGAGAGGAAAATCCTTTTCTAAGCTGTATCTAGACTGCATTCCAAAAAC 97667
|| | |||||||| || | | | | |||| | | |||||| || || ||
Sbjct 24853 GTCAGCAGAGGAAATTCATCTCTCAGGTTGTACCGCGCCTGCATCCCGAACAC 24801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346457212432400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |