Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq75383 98.7 6e-16
>seq75383
Length=1910755
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | ||| |||||||| ||||||||||| ||||| || | ||
Sbjct 168989 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 168930
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| || || || || || | || ||||||||| ||| | || || || ||
Sbjct 168929 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCTTCTTTTTCT 168870
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
|||||| ||| | || | || | || ||| || || |||| |||||||||
Sbjct 168869 TGTATCTTCACCTTGACATTCTCGATGGTGTCACTCGGCTCCACCTCCAGAGTGATGGTT 168810
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || ||||| || || ||||||||||||||
Sbjct 168809 TTACCAGTGAGGGTCTTTACAAAGATCTGCAT 168778
Score = 89.7 bits (98), Expect = 3e-13
Identities = 148/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236
||| |||||||| | ||| || ||||| ||||||||||| ||||| || | ||
Sbjct 170130 CAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 170071
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|||| ||| || || || || || |||| ||||||||| ||| | || ||| |||||
Sbjct 170070 TTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTC 170011
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 170010 TTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 169951
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||||| || | || ||||| ||||||||||||
Sbjct 169950 CTTGCCCGTCAAGGTCTTCACGAAGATCTGCATC 169917
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | ||| || ||||| ||||||||||| ||||| || | ||
Sbjct 169217 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 169158
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| || || || || || |||| ||||||||| ||| | || ||| |||||
Sbjct 169157 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 169098
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 169097 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 169038
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||||| || | || ||||| ||||||||||||
Sbjct 169037 TTGCCCGTCAAGGTCTTCACGAAGATCTGCATC 169005
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | ||| || ||||| ||||||||||| ||||| || | ||
Sbjct 169445 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 169386
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| || || || || || |||| ||||||||| ||| | || ||| |||||
Sbjct 169385 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 169326
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 169325 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 169266
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||||| || | || ||||| ||||||||||||
Sbjct 169265 TTGCCCGTCAAGGTCTTCACGAAGATCTGCATC 169233
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | ||| || ||||| ||||||||||| ||||| || | ||
Sbjct 169673 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 169614
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| || || || || || |||| ||||||||| ||| | || ||| |||||
Sbjct 169613 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 169554
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 169553 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 169494
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||||| || | || ||||| ||||||||||||
Sbjct 169493 TTGCCCGTCAAGGTCTTCACGAAGATCTGCATC 169461
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | ||| || ||||| ||||||||||| ||||| || | ||
Sbjct 169901 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 169842
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| || || || || || |||| ||||||||| ||| | || ||| |||||
Sbjct 169841 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 169782
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 169781 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 169722
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||||| || | || ||||| ||||||||||||
Sbjct 169721 TTGCCCGTCAAGGTCTTCACGAAGATCTGCATC 169689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 322767557139200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |