Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq29163 114 1e-20
>seq29163
Length=2664742
Score = 114 bits (126), Expect = 1e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285
|||| ||||| ||||||||||| || ||||| || | || ||||||| ||||||||| |
Sbjct 301517 CCTCGTCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGTCCTCGTTTCT 301458
Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345
| | ||| ||||| | || || || ||||||||||| || || || ||||||||||| |
Sbjct 301457 TGAGCCAGAATATAGACGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 301398
Query 14346 CTATTAATCGTTCTCC 14361
||| | ||||||||
Sbjct 301397 CTACCACACGTTCTCC 301382
Score = 102 bits (112), Expect = 8e-17
Identities = 80/96 (83%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 13898 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13957
|| || || |||||| | ||||| || | ||||| || |||||||||||||| || ||
Sbjct 303116 GACATCACTCCCATTCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCC 303057
Query 13958 TCCAGTGATATATTTTCCATAAAATCAAATGGATTT 13993
|||||||| |||||||||||||| ||||||||||||
Sbjct 303056 TCCAGTGAAATATTTTCCATAAAGTCAAATGGATTT 303021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 481879412977600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |