Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq23781 131 3e-25
>seq23781
Length=1882226
Score = 131 bits (144), Expect = 3e-25
Identities = 361/545 (66%), Gaps = 14/545 (3%)
Strand=Plus/Plus
Query 35247 TTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCA 35306
||||||||| ||| ||| |||| || | |||||| |||| ||| || |||| |
Sbjct 24865 TTTTCTGGAAAGGTGTTTTGGAGGAGTTGCTGTGGTTTATCAAGGGATCCACCAACGCTA 24924
Query 35307 AAGAATTGGC---CAAGAAGAAGATACACATCTGGAACGCTAATGGGTCGCGGGAATTTT 35363
| ||| || | |||| | || | | || ||| | || || ||||| || || || |
Sbjct 24925 AGGAACTGTCTTCCAAG--GGAGTGAAA-ATTTGGGATGCCAACGGGTCCCGAGACTTCT 24981
Query 35364 TGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCC 35423
|||| | || || | | ||||||| || || |||||||| || || || || ||||
Sbjct 24982 TGGATGGCTTGGGCTTCTCCAATAGAGCTGAAGGGGATTTGGGCCCGGTTTATGGCTTCC 25041
Query 35424 AATGGCGTCATTTTGGTGCTGAATAT---GATACCTGTTCTTCCGATTATACTGGAAAGG 35480
| ||| | |||||||| |||||||| |||| || ||| |||||| | || | |
Sbjct 25042 AGTGGAGGCATTTTGGGGCTGAATACAAAGATA--TGGA-TTCAGATTATTCAGGTCAAG 25098
Query 35481 GTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGA 35540
| | |||||| || || | | | || | | | || || | | ||||| |
Sbjct 25099 GAGTAGATCAACTGCAAAAAGTGATCGACACAATCAAAACCAACCCTAACAACAGAAGAA 25158
Query 35541 TGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACA 35600
| || || || |||||||| | ||||| | || ||||| || || |||||||||
Sbjct 25159 TCATCCTGTGTGCTTGGAATCCAAAAGATCTCCCTCTCATGGCCCTCCCCCCATGCCACG 25218
Query 35601 TGA-CTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGC 35659
|||| || || || |||| ||||| || |||| ||||||||||| || |
Sbjct 25219 CCCTCTGC-CAGTTCTACGTGGTGAATGGGGAGCTGTCCTGCCAGTTGTACCAAAGGTCG 25277
Query 35660 GGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTCTCTTCTGACTCATCTG 35719
||||| | || |||| ||||||||||||||||| ||| | || || || | ||
Sbjct 25278 GGAGACATGGGCCTGGGTGTGCCCTTCAATATTGCCAGCTACGCCCTGCTCACCTACATG 25337
Query 35720 ATGGCCAGTATGGTGGGTCTAAAACCGGGAGAGTTTATCCTCACTCTTGGTGACGCACAC 35779
|| || || || || || || || || || | | |||||| || || ||||||
Sbjct 25338 ATCGCACACATCACGGACCTGAAGCCAGGTGACTTCGTACACACTCTGGGAGATGCACAC 25397
Query 35780 ATTTA 35784
|||||
Sbjct 25398 ATTTA 25402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 988603656240600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |