Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_003278.1
Length=35580
Score E
Sequences producing significant alignments: (Bits) Value
seq15303 114 3e-21
>seq15303
Length=32000
Score = 114 bits (126), Expect = 3e-21
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 29536 CAAGGACTACCGCCCCGAGTGGCTGGACTGGCTGTGGACCTGCTTCGGCGCCAAGGGCCT 29595
||| | ||| ||| || ||||||| | ||||||| |||||||||| ||||| ||
Sbjct 31530 CAAAGGCTATCGCGATGACTGGCTGGCCAAGCTGTGGTTGTGCTTCGGCGAAAAGGGACT 31589
Query 29596 GGTGGCGCTGGCATTCTGGTTCGGCTCGCTGTTCGCGGAGCAGATCCGCGCCGAGTTCCA 29655
|| || ||| | || ||||| || || |||||| | || |||||| | || ||| | |
Sbjct 31590 GGCTGCACTGACGTTTTGGTTTGGTTCACTGTTCTCAGAACAGATCAGGGCACAGTACGA 31649
Query 29656 GTCCTTTCCGTTCCTCGAGGCCACCGGCGAGGCCGGTGCCGGCAAATCCACGCTGATCAC 29715
||| |||||||| |||||||| ||||| | | || || || |||| |||| |
Sbjct 31650 AAGCTTCCCGTTCCTGGAGGCCACTGGCGAACCAGACGCGGGTAAGACCACATTGATTAT 31709
Query 29716 CTTCCTGTGGAAGCTGCTCGGCCGGGCGGACGAGGAAGGCCAGGACCC 29763
||||||||||| || |||| ||| | || | |||||| |||||
Sbjct 31710 GTTCCTGTGGAAACTCTTCGGGCGGCCCCACTACGAAGGCTTCGACCC 31757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 113629971917280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |