Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_003278.1 Length=35580 Score E Sequences producing significant alignments: (Bits) Value seq15303 114 3e-21 >seq15303 Length=32000 Score = 114 bits (126), Expect = 3e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29536 CAAGGACTACCGCCCCGAGTGGCTGGACTGGCTGTGGACCTGCTTCGGCGCCAAGGGCCT 29595 ||| | ||| ||| || ||||||| | ||||||| |||||||||| ||||| || Sbjct 31530 CAAAGGCTATCGCGATGACTGGCTGGCCAAGCTGTGGTTGTGCTTCGGCGAAAAGGGACT 31589 Query 29596 GGTGGCGCTGGCATTCTGGTTCGGCTCGCTGTTCGCGGAGCAGATCCGCGCCGAGTTCCA 29655 || || ||| | || ||||| || || |||||| | || |||||| | || ||| | | Sbjct 31590 GGCTGCACTGACGTTTTGGTTTGGTTCACTGTTCTCAGAACAGATCAGGGCACAGTACGA 31649 Query 29656 GTCCTTTCCGTTCCTCGAGGCCACCGGCGAGGCCGGTGCCGGCAAATCCACGCTGATCAC 29715 ||| |||||||| |||||||| ||||| | | || || || |||| |||| | Sbjct 31650 AAGCTTCCCGTTCCTGGAGGCCACTGGCGAACCAGACGCGGGTAAGACCACATTGATTAT 31709 Query 29716 CTTCCTGTGGAAGCTGCTCGGCCGGGCGGACGAGGAAGGCCAGGACCC 29763 ||||||||||| || |||| ||| | || | |||||| ||||| Sbjct 31710 GTTCCTGTGGAAACTCTTCGGGCGGCCCCACTACGAAGGCTTCGACCC 31757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113629971917280