Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_003309.1
Length=53373
Score E
Sequences producing significant alignments: (Bits) Value
seq6427 228 3e-55
>seq6427
Length=47605
Score = 228 bits (252), Expect = 3e-55
Identities = 265/352 (75%), Gaps = 4/352 (1%)
Strand=Plus/Plus
Query 31764 CGCTTCGTCAGTAGCAGCCAGTCGAGATTTGGCGTGTTGCTGATCAAATCGAAGAGATCG 31823
|| ||||||| |||||||||||||||| ||||||| |||||||| || | | ||
Sbjct 19778 CGTTTCGTCAAAAGCAGCCAGTCGAGATCCGGCGTGTCCCTGATCAATTCCCACAATTCT 19837
Query 31824 ACTCGCCACATCGGATAGACCGCGTTGTCGAACACGTCCGCAAGCGACGAGCAAAAGACG 31883
||||||| | ||||| || || ||||||||||| ||||| | || || || || |||
Sbjct 19838 GCTCGCCAGAGCGGATCAACGGCATTGTCGAACACATCCGCCAATGAGGAACAGAAAACG 19897
Query 31884 CGCTGGCGCCGGCCGCGGGCGGCGAAGAACTG-TTCG-TGCGCTGCGTTCCACGCGAGCG 31941
|||||||| |||||| ||| | |||||| |||| | ||| || | ||| | |||
Sbjct 19898 CGCTGGCGGCGGCCGTTGGCCGAAAAGAACGCCTTCGCTTCGC-GC-TGCCATCTGCGCG 19955
Query 31942 GCTTGCGCCAGTTTGCGGCTGACGTGCGACGCCGCGGTGCGCCCGGTCCCCAGTTCACGG 32001
| ||| |||||| ||| || || |||||||| ||||| |||||||| ||| |
Sbjct 19956 GTTTGAACCAGTTGGCGAGCGATGTCTTGCGCCGCGGCGCGCCTGGTCCCCAATTCGTCG 20015
Query 32002 CCGAGCCGCCAGCGAAGCGTGCATTGCGCGCCTCGGCGTAACAGTGGTCGCATCCCGGAC 32061
| |||||| ||||||| |||||||||||||||||||| |||||||| || ||
Sbjct 20016 CAATACCGCCACCGAAGCGCTGGTTGCGCGCCTCGGCGTAACAATGGTCGCAGCCAGGCG 20075
Query 32062 CGACCTTCTGGCAACCTTCCCACGGGTTGAACGTGTGGTCGCACCATTCGAT 32113
||||||||||| || |||||||| || ||||||||||||||||| || ||
Sbjct 20076 AAACCTTCTGGCATCCCTCCCACGGATTAAACGTGTGGTCGCACCACTCAAT 20127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 170515293236400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |