Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq42836 86.0 5e-12
>seq42836
Length=1893264
Score = 86.0 bits (94), Expect = 5e-12
Identities = 161/233 (69%), Gaps = 3/233 (1%)
Strand=Plus/Minus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
||| |||| ||||| ||||| ||||| | |||| ||||||||| | ||||| || ||
Sbjct 1011612 GCCACCACAAAGTCTCAACACTAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 1011553
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
||| |||||| | || |||| ||| || || ||||| |||| || || || || | ||
Sbjct 1011552 CAAAGTACGTCCATCTTCCACTTGCTTCCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGG 1011493
Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGAC-TCTGCCAACTGTGTCGCCAGCCTCGA 43060
| ||||| || || |||| | | || ||| | | ||| || | |||||
Sbjct 1011492 AATTCCTTCCTTATCCTGGATCTTGACCATTACATCTTCTAT-TGTTTCCGAGGGCTCGA 1011434
Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTA-GAGTTTTCACAAAAATTTGCATTTT 43112
| | | || || || || || || | |||| ||||||||||| ||||| ||
Sbjct 1011433 CCTTGAGAGTGATGGTCTTCCCTGTCAAGAGTCTTCACAAAAATCTGCATCTT 1011381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381010221124560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |