Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq23781 187 4e-42
>seq23781
Length=1882226
Score = 187 bits (206), Expect = 4e-42
Identities = 482/732 (66%), Gaps = 2/732 (0%)
Strand=Plus/Plus
Query 69896 CCTCTGTTGACGACCAAGACTGTCTTTGTCAAGGGCGTCATCGAGGAGCTCTTGTGGATG 69955
|||||| |||| ||||| ||| || || || || | |||||| | ||||| |
Sbjct 24843 CCTCTGCTGACAACCAAACGTGTTTTCTGGAAAGGTGTTTTGGAGGAGTTGCTGTGGTTT 24902
Query 69956 ATTTCCGGATCGACCAATGCCAAAGAGCTGAGCCGAAAGGGTGTACACATTTGGAGCGGC 70015
|| ||||| ||||| || || || ||| ||||| || | |||||| | |
Sbjct 24903 ATCAAGGGATCCACCAACGCTAAGGAACTGTCTTCCAAGGGAGTGAAAATTTGGGATGCC 24962
Query 70016 AACAGTAGTCGAAGCGTTTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTG 70075
||| | ||| | | |||||| | |||||| || | ||| || || ||| ||
Sbjct 24963 AACGGGTCCCGAGACTTCTTGGATGGCTTGGGCTTCTCCAATAGAGCTGAAGGGGATTTG 25022
Query 70076 GGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGACA 70135
|| || || || || |||||||||||||| | || | | || ||| || ||
Sbjct 25023 GGCCCGGTTTATGGCTTCCAGTGGAGGCATTTTGGGGCTGAATACAAAGATATGGATTCA 25082
Query 70136 GACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACCAAT 70195
|| ||||| ||||| || || |||||| |||| | | | || ||||| |||| |||||
Sbjct 25083 GATTATTCAGGTCAAGGAGTAGATCAACTGCAAAAAGTGATCGACACAATCAAAACCAAC 25142
Query 70196 CC-AACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGC 70254
|| |||| | || || ||| | |||| | |||||||| |||| | | | |||||
Sbjct 25143 CCTAACA-ACAGAAGAATCATCCTGTGTGCTTGGAATCCAAAAGATCTCCCTCTCATGGC 25201
Query 70255 ACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTGTCATGCTT 70314
|| || || || ||| | ||||| ||| | |||| | |||| |||
Sbjct 25202 CCTCCCCCCATGCCACGCCCTCTGCCAGTTCTACGTGGTGAATGGGGAGCTGTCCTGCCA 25261
Query 70315 AATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTC 70374
|||| || ||| | ||||||||||| ||||| ||||| || ||||| ||||| |
Sbjct 25262 GTTGTACCAAAGGTCGGGAGACATGGGCCTGGGTGTGCCCTTCAATATTGCCAGCTACGC 25321
Query 70375 TATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACGAGTTCGTACACAC 70434
|| | || ||||||| || ||||| || | |||||| | || |||||||||||
Sbjct 25322 CCTGCTCACCTACATGATCGCACACATCACGGACCTGAAGCCAGGTGACTTCGTACACAC 25381
Query 70435 CATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGGTGCAACTCGAACG 70494
| || || || ||| | || | ||||||||||||||| | ||| || || | ||
Sbjct 25382 TCTGGGAGATGCACACATTTACCTGAATCACATCGAGCCACTGAAGACTCAGCTTCAGCG 25441
Query 70495 GGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTGAAAATATTGACAGTTT 70554
|| || || ||||| |||||||| | | | | |||||||| | || || ||
Sbjct 25442 AGAACCAAGGCCTTTCCCCAAGCTCAAAATCCTTTGAAAAGTTGAGACAATCGATGACTT 25501
Query 70555 TAAGTACGAAGATTTTATAATAAAAGGTTACGATCCATACCCTAAGATTCCCATGGTTCT 70614
||| ||||| ||| || |||| ||| |||| |||| | ||| |||| |
Sbjct 25502 CAAGGCTGAAGACTTTCAGATTGAAGGCTACAATCCTCACCCGACTATTAAAATGGAAAT 25561
Query 70615 GGCTGTTTAGAG 70626
|||||| |||||
Sbjct 25562 GGCTGTCTAGAG 25573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740342966283200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |