Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_004456.1 Length=43198 Score E Sequences producing significant alignments: (Bits) Value seq46032 102 2e-17 >seq46032 Length=7000 Score = 102 bits (112), Expect = 2e-17 Identities = 170/246 (69%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 25967 GACCTGTGGAACCCATATTCCTGCCATTTGTCGTTGCTGCCTTGGCTGGCCTGGGCCCTG 26026 || |||||| |||| | | || | ||||| || ||||||||||| || |||||| Sbjct 12 GATCTGTGGGACCCGTTTCGTTGTCCGTTGTCATTACTGCCTTGGCTCGCATGGGCCTAC 71 Query 26027 TCTGTGGATGAATGGGACGACCGCTGGCCGGAGCATATCAAGCGGCAGGTGGTACAAGAC 26086 || || ||| | ||||| ||| | ||||| || | ||||| || || || | || Sbjct 72 TCAGTCGATCAGTGGGAAGACAGTTGGCCCGAAAGCGTGAAGCGCCAAGTCGTTAATGAT 131 Query 26087 TCTTTTGATGTTCACCGTTTTAAAGGCACCCCGTATGCGGTGCAAAAGGCGCTGGACAGT 26146 | || || |||| |||| ||||| ||| || |||||||||||| ||| || | ||| Sbjct 132 GCGTTCGACATTCATCGTTATAAAGCCACGCCCTATGCGGTGCAACGGGCACTCAATAGT 191 Query 26147 TTGAATATCAAAACGCACCTACGGGAGTGGTGGGAGCCTGACGGAAGCCAGGAGCCCGGC 26206 | || |||| || | ||||||||||||||| | || ||| | | || |||| Sbjct 192 CTTGGGATTGAAACCAACATCATCGAGTGGTGGGAGCCTAATGGCAGCAACGTGCGCGGC 251 Query 26207 ACCATG 26212 || ||| Sbjct 252 ACGATG 257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137985189014400