Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_004456.1
Length=43198
Score E
Sequences producing significant alignments: (Bits) Value
seq46032 102 2e-17
>seq46032
Length=7000
Score = 102 bits (112), Expect = 2e-17
Identities = 170/246 (69%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 25967 GACCTGTGGAACCCATATTCCTGCCATTTGTCGTTGCTGCCTTGGCTGGCCTGGGCCCTG 26026
|| |||||| |||| | | || | ||||| || ||||||||||| || ||||||
Sbjct 12 GATCTGTGGGACCCGTTTCGTTGTCCGTTGTCATTACTGCCTTGGCTCGCATGGGCCTAC 71
Query 26027 TCTGTGGATGAATGGGACGACCGCTGGCCGGAGCATATCAAGCGGCAGGTGGTACAAGAC 26086
|| || ||| | ||||| ||| | ||||| || | ||||| || || || | ||
Sbjct 72 TCAGTCGATCAGTGGGAAGACAGTTGGCCCGAAAGCGTGAAGCGCCAAGTCGTTAATGAT 131
Query 26087 TCTTTTGATGTTCACCGTTTTAAAGGCACCCCGTATGCGGTGCAAAAGGCGCTGGACAGT 26146
| || || |||| |||| ||||| ||| || |||||||||||| ||| || | |||
Sbjct 132 GCGTTCGACATTCATCGTTATAAAGCCACGCCCTATGCGGTGCAACGGGCACTCAATAGT 191
Query 26147 TTGAATATCAAAACGCACCTACGGGAGTGGTGGGAGCCTGACGGAAGCCAGGAGCCCGGC 26206
| || |||| || | ||||||||||||||| | || ||| | | || ||||
Sbjct 192 CTTGGGATTGAAACCAACATCATCGAGTGGTGGGAGCCTAATGGCAGCAACGTGCGCGGC 251
Query 26207 ACCATG 26212
|| |||
Sbjct 252 ACGATG 257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137985189014400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |