Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq33366 82.4 5e-11
>seq33366
Length=1752596
Score = 82.4 bits (90), Expect = 5e-11
Identities = 148/215 (69%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220
|||| |||| ||||||||||| || || ||||||||||| | | || | || |||
Sbjct 780156 ACCAGGTGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 780097
Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---G 33277
| ||||| || ||| || | | |||||||| | ||| |||||||| || || |
Sbjct 780096 AGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCCTGG 780037
Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337
| | ||| || || | | || ||||| |||| | || ||||| || || ||
Sbjct 780036 ATCTTGGCC---TTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 779980
Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
|| || || || ||||| ||||| |||||||| ||
Sbjct 779979 TTGCCGGTCAGGGTTTTCACGAAGATTTGCATTTT 779945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318477203913360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |