Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq33366 82.4 5e-11 >seq33366 Length=1752596 Score = 82.4 bits (90), Expect = 5e-11 Identities = 148/215 (69%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 |||| |||| ||||||||||| || || ||||||||||| | | || | || ||| Sbjct 780156 ACCAGGTGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 780097 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---G 33277 | ||||| || ||| || | | |||||||| | ||| |||||||| || || | Sbjct 780096 AGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCCTGG 780037 Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 | | ||| || || | | || ||||| |||| | || ||||| || || || Sbjct 780036 ATCTTGGCC---TTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 779980 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 || || || || ||||| ||||| |||||||| || Sbjct 779979 TTGCCGGTCAGGGTTTTCACGAAGATTTGCATTTT 779945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318477203913360