Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_005344.1
Length=39043
Score E
Sequences producing significant alignments: (Bits) Value
seq12156 156 1e-33
>seq12156
Length=2201700
Score = 156 bits (172), Expect = 1e-33
Identities = 239/341 (70%), Gaps = 0/341 (0%)
Strand=Plus/Plus
Query 32873 TGGAACTGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTCCAGTATCGATTT 32932
|| ||||| ||||||||| |||| ||||||| | ||||||| ||||| ||| | |
Sbjct 143211 TGAAACTGTAGTGGTCAAGTAAAATTGGCCACGGTTTTAGAGTCATTCCAATATAAACGT 143270
Query 32933 TCCGATTCGTTTGGGGGTAACCCACCGTTATATTCGTGCGGTCTTAGTGCACTGTAATAT 32992
|| || || ||||| | ||||||||| ||||||| || ||||| |||||||||||
Sbjct 143271 TCTGACTCATTTGGCGTTAACCCACCATTATATTGATGGGGTCTGGTCTCACTGTAATAT 143330
Query 32993 CCAACGATATAGTCCGTTATGGCGTGAGCTGCCTCGCTGAAGCTTACGTAACCCACCACC 33052
||| ||| || | || || | | | |||| || | || | | ||||| |
Sbjct 143331 CCAGTGATGTAATTTGTGATCTCTTTATCTGCTTCTGTAAAATTCCCATAACCACTGGCG 143390
Query 33053 GGCATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAG 33112
|| ||||| || |||| ||| || ||||| || |||||||| ||||||||| ||
Sbjct 143391 GGTATCCACTCAGATTTCAAACTTCTAAAGAAACGCTCCATTGGTGCGTTATCCCAACAA 143450
Query 33113 TTTCCGCGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAACTGCCGGAACTGC 33172
|| ||||| || |||||||| || ||||| ||||| | ||| || | ||| | |
Sbjct 143451 TTCCCGCGACGACTCATACTTTGCTCAATCTGAAGACGCCATATTAATTGTCTGAATTTC 143510
Query 33173 CTGCTCGTATAATGACTGCCCTGATCGCTGTGGAACATCAC 33213
|||||| ||||| || ||||||||||| | |||||
Sbjct 143511 AAGCTCGTGTAATGTGAACCTTGATCGCTGTGATATATCAC 143551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124701397069200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |