Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq12156 156 1e-33 >seq12156 Length=2201700 Score = 156 bits (172), Expect = 1e-33 Identities = 239/341 (70%), Gaps = 0/341 (0%) Strand=Plus/Plus Query 32873 TGGAACTGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTCCAGTATCGATTT 32932 || ||||| ||||||||| |||| ||||||| | ||||||| ||||| ||| | | Sbjct 143211 TGAAACTGTAGTGGTCAAGTAAAATTGGCCACGGTTTTAGAGTCATTCCAATATAAACGT 143270 Query 32933 TCCGATTCGTTTGGGGGTAACCCACCGTTATATTCGTGCGGTCTTAGTGCACTGTAATAT 32992 || || || ||||| | ||||||||| ||||||| || ||||| ||||||||||| Sbjct 143271 TCTGACTCATTTGGCGTTAACCCACCATTATATTGATGGGGTCTGGTCTCACTGTAATAT 143330 Query 32993 CCAACGATATAGTCCGTTATGGCGTGAGCTGCCTCGCTGAAGCTTACGTAACCCACCACC 33052 ||| ||| || | || || | | | |||| || | || | | ||||| | Sbjct 143331 CCAGTGATGTAATTTGTGATCTCTTTATCTGCTTCTGTAAAATTCCCATAACCACTGGCG 143390 Query 33053 GGCATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAG 33112 || ||||| || |||| ||| || ||||| || |||||||| ||||||||| || Sbjct 143391 GGTATCCACTCAGATTTCAAACTTCTAAAGAAACGCTCCATTGGTGCGTTATCCCAACAA 143450 Query 33113 TTTCCGCGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAACTGCCGGAACTGC 33172 || ||||| || |||||||| || ||||| ||||| | ||| || | ||| | | Sbjct 143451 TTCCCGCGACGACTCATACTTTGCTCAATCTGAAGACGCCATATTAATTGTCTGAATTTC 143510 Query 33173 CTGCTCGTATAATGACTGCCCTGATCGCTGTGGAACATCAC 33213 |||||| ||||| || ||||||||||| | ||||| Sbjct 143511 AAGCTCGTGTAATGTGAACCTTGATCGCTGTGATATATCAC 143551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124701397069200