Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq23781 239 3e-58
>seq23781
Length=1882226
Score = 239 bits (264), Expect = 3e-58
Identities = 401/579 (69%), Gaps = 1/579 (0%)
Strand=Plus/Minus
Query 25387 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGT 25446
|||| || || || || || | || |||||||||||||| || || | ||||| |||||
Sbjct 25461 TGGGGAAAGGCCTTGGTTCTCGCTGAAGCTGAGTCTTCAGTGGCTCGATGTGATTCAGGT 25402
Query 25447 AGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAG 25506
| | ||| || |||||||||||||| || || || || || | || | || | || |
Sbjct 25401 AAATGTGTGCATCTCCCAGAGTGTGTACGAAGTCACCTGGCTTCAGGTCCGTGATGTGTG 25342
Query 25507 CCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGT 25566
| |||||||| ||||| || ||||||||| || || ||||| || || | |||||||
Sbjct 25341 CGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATATTGAAGGGCACACCCAGGCCCATGT 25282
Query 25567 CCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACAC 25626
| |||||||| ||||| | ||| || || ||||| | | |||||| ||||| ||
Sbjct 25281 -CTCCCGACCTTTGGTACAACTGGCAGGACAGCTCCCCATTCACCACGTAGAACTGGCAG 25223
Query 25627 ATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACG 25686
| || || ||| || || || || || || | ||||| || ||||| || |||| |
Sbjct 25222 AGGGCGTGGCATGGGGGGAGGGCCATGAGAGGGAGATCTTTTGGATTCCAAGCACACAGG 25163
Query 25687 ATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCGGTGTTTTGCAGCTGATCC 25746
||||| | |||| | |||||| |||| || |||||||| |||||
Sbjct 25162 ATGATTCTTCTGTTGTTAGGGTTGGTTTTGATTGTGTCGATCACTTTTTGCAGTTGATCT 25103
Query 25747 ACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCAC 25806
|| || || || || |||| ||| || |||| || || || |||| |||||||
Sbjct 25102 ACTCCTTGACCTGAATAATCTGAATCCATATCTTTGTATTCAGCCCCAAAATGCCTCCAC 25043
Query 25807 TGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCC 25866
||||| || || ||||| || | || || || | || | |||||| ||||
Sbjct 25042 TGGAAGCCATAAACCGGGCCCAAATCCCCTTCAGCTCTATTGGAGAAGCCCAAGCCATCC 24983
Query 25867 AAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTG 25926
|| ||||||| ||| || ||||| ||||| || || || ||||| || || || ||
Sbjct 24982 AAGAAGTCTCGGGACCCGTTGGCATCCCAAATTTTCACTCCCTTGGAAGACAGTTCCTTA 24923
Query 25927 GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCC 25965
| ||| ||||| || ||| |||||||||| |||| ||
Sbjct 24922 GCGTTGGTGGATCCCTTGATAAACCACAGCAACTCCTCC 24884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 339817075584360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |