Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_007581.1 Length=185683 Score E Sequences producing significant alignments: (Bits) Value seq7709 93.3 5e-14 >seq7709 Length=610 Score = 93.3 bits (102), Expect = 5e-14 Identities = 152/216 (70%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 39047 AAAAGTGGCTAAATTACATGAGAAAATAACTAATCAAAGAAAAAATTTTTTGCATAAGTT 39106 |||||| || || | ||||||||||||| ||| | ||| | ||| | ||||| | Sbjct 82 AAAAGTCGCCAAGGTCTATGAGAAAATAACCAATACTCGCAAAGACTTTCTACATAAACT 141 Query 39107 ATCAATTAAACTAATAAGAGAAAACCA--AT-CTATAGTTATTGAGGACTTAAAAGTAAA 39163 ||| | || || || | ||||||| || ||| | |||||||||||| || || || Sbjct 142 CTCATTCAATCTCATCA---AAAACCACGATGTTATTGCTATTGAGGACTTGAACGTCAA 198 Query 39164 AAATATGTTACAAAATCATAAGTTAGCAAAAGCAATAAGTGAAGTGTCATGGTATGAATT 39223 |||| | | ||||| || | ||||||||||| ||||| ||||||| ||| Sbjct 199 GGGTATGGTTAAGAATCACAAACTTGCAAAAGCAATCAGTGACAGCTCATGGTCGTCATT 258 Query 39224 TAGAACAATGCTAGAATATAAAGCTGACTGGTATGG 39259 || || ||||| | |||||||| |||||||| || Sbjct 259 TACCACCATGCTTGCCTATAAAGCAGACTGGTACGG 294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593483443329600