Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq75383 104 2e-17
>seq75383
Length=1910755
Score = 104 bits (114), Expect = 2e-17
Identities = 162/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
||| |||| || | || |||| ||||| ||||||||||| || ||||||||||| |
Sbjct 169233 CCCACCTCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 169174
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
|| ||| | || |||| ||||| || ||| | || |||| ||| ||||| ||
Sbjct 169173 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGG 169114
Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885
| |||||||||||| || || || ||| || | | | ||||| | |||||||
Sbjct 169113 GATGCCCTCTTTGTCTTGGATCTTGGC--CTTGACGTTCTCGATGGTGTCACTGGGCTCC 169056
Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||||||| || || |||| || || || || ||||||||
Sbjct 169055 ACCTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 169006
Score = 104 bits (114), Expect = 2e-17
Identities = 162/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
||| |||| || | || |||| ||||| ||||||||||| || ||||||||||| |
Sbjct 169461 CCCACCTCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 169402
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
|| ||| | || |||| ||||| || ||| | || |||| ||| ||||| ||
Sbjct 169401 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGG 169342
Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885
| |||||||||||| || || || ||| || | | | ||||| | |||||||
Sbjct 169341 GATGCCCTCTTTGTCTTGGATCTTGGC--CTTGACGTTCTCGATGGTGTCACTGGGCTCC 169284
Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||||||| || || |||| || || || || ||||||||
Sbjct 169283 ACCTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 169234
Score = 104 bits (114), Expect = 2e-17
Identities = 162/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
||| |||| || | || |||| ||||| ||||||||||| || ||||||||||| |
Sbjct 169689 CCCACCTCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 169630
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
|| ||| | || |||| ||||| || ||| | || |||| ||| ||||| ||
Sbjct 169629 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGG 169570
Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885
| |||||||||||| || || || ||| || | | | ||||| | |||||||
Sbjct 169569 GATGCCCTCTTTGTCTTGGATCTTGGC--CTTGACGTTCTCGATGGTGTCACTGGGCTCC 169512
Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||||||| || || |||| || || || || ||||||||
Sbjct 169511 ACCTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 169462
Score = 104 bits (114), Expect = 2e-17
Identities = 162/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
||| |||| || | || |||| ||||| ||||||||||| || ||||||||||| |
Sbjct 169917 CCCACCTCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 169858
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
|| ||| | || |||| ||||| || ||| | || |||| ||| ||||| ||
Sbjct 169857 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGG 169798
Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885
| |||||||||||| || || || ||| || | | | ||||| | |||||||
Sbjct 169797 GATGCCCTCTTTGTCTTGGATCTTGGC--CTTGACGTTCTCGATGGTGTCACTGGGCTCC 169740
Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||||||| || || |||| || || || || ||||||||
Sbjct 169739 ACCTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 169690
Score = 104 bits (114), Expect = 2e-17
Identities = 153/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| ||||| ||||||||||| || ||||||||||| | || ||| | ||
Sbjct 170130 CAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 170071
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| ||||| || ||| | || |||| ||| ||||| || | ||||||||||||
Sbjct 170070 TTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTC 170011
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || || ||| || | | | ||||| | ||||||| |||| |||||||
Sbjct 170010 TTGGATCTTGGC--CTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 169953
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || || |||| || || || || ||||||||
Sbjct 169952 GTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 169918
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
||| |||| || | || |||| ||||| |||||||| || || ||||||||||| |
Sbjct 169005 CCCACCTCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGA 168946
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
|| ||| | || |||| ||||| || ||| | || | || ||| ||||| ||
Sbjct 168945 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 168886
Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887
| ||| ||||| || || | | ||| || | | | ||||| | ||||||
Sbjct 168885 GATGCCTTCTTTTTCTTGTATCTTCACCTTGACATTCTCGATGGTGTCACTCGGCTCCAC 168826
Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|||| ||||||||||| || || || || || ||||| |||||||||
Sbjct 168825 CTCCAGAGTGATGGTTTTACCAGTGAGGGTCTTTACAAAGATCTGCATT 168777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404706270386800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |