Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq23781 215 5e-51
>seq23781
Length=1882226
Score = 215 bits (238), Expect = 5e-51
Identities = 440/651 (68%), Gaps = 2/651 (0%)
Strand=Plus/Minus
Query 20171 AGTGGCTCTATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCG 20230
|||||||| || || | ||| ||||| |||||||||| ||||| | || || ||
Sbjct 25423 AGTGGCTCGATGTGATTCAGGTAAATGTGTGCATCTCCCAGAGTGTGTACGAAGTCACCT 25364
Query 20231 GGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTA 20290
|| | || | || | || || | ||| || || | |||| ||||||||||| ||
Sbjct 25363 GGCTTCAGGTCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATATTG 25304
Query 20291 AAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCG 20350
|| || || |||| ||||||||||||||||| || |||| ||| ||||| ||||| ||
Sbjct 25303 AAGGGCACACCCAGGCCCATGTCTCCCGACCTTTGGTACAACTGGCAGGACAGCTCCCCA 25244
Query 20351 TCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCC 20410
| | || || || || || | ||| || || || || ||||| | | | ||
Sbjct 25243 TTCACCACGTAGAACTGGCAGAGGGCGTGGCATGGGGGGAGGGCCATGAGAGGGAGATCT 25184
Query 20411 GCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCC 20470
|| ||||| ||||||| ||||||||||| | || || || |||| ||| ||
Sbjct 25183 TTTGGATTCCAAGCACACAGGATGATTCTTCTGTTGTTAGGGTTGGTTTTGATTGTGTCG 25124
Query 20471 A-CAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTA 20529
| || | | | || ||| || | || || |||| ||| || | |||| || |||
Sbjct 25123 ATCACTTTTTG-CAGTTGATCTACTCCTTGACCTGAATAATCTGAATCCATATCTTTGTA 25065
Query 20530 CGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCT 20589
| |||||||| |||||||||||||| || ||||| || ||||||||||| || |||
Sbjct 25064 TTCAGCCCCAAAATGCCTCCACTGGAAGCCATAAACCGGGCCCAAATCCCCTTCAGCTCT 25005
Query 20590 GTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGAC 20649
| | | ||| || ||| ||| || | ||| || || ||||| || || ||
Sbjct 25004 ATTGGAGAAGCCCAAGCCATCCAAGAAGTCTCGGGACCCGTTGGCATCCCAAATTTTCAC 24945
Query 20650 TCCTGTTCTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTG 20709
||| | || || ||| | | || || ||||| | |||||| |||| ||| |
Sbjct 24944 TCCCTTGGAAGACAGTTCCTTAGCGTTGGTGGATCCCTTGATAAACCACAGCAACTCCTC 24885
Query 20710 CACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAAAGTGGTCCCGCAGACT 20769
|| || ||| ||| || || || || || || || | ||||| | || | ||| |
Sbjct 24884 CAAAACACCTTTCCAGAAAACACGTTTGGTTGTCAGCAGAGGAAATTCATCTCTCAGGTT 24825
Query 20770 ATACCTGGCCTGCATGCCAAATAGAGAGAGGGTGCCTATGCCGGTGCGGTC 20820
|||| |||||||| || || | || |||||||| |||||||||||||
Sbjct 24824 GTACCGCGCCTGCATCCCGAACACCGACAGGGTGCCAGTGCCGGTGCGGTC 24774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 440946213188800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |