Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq32659 134 6e-27 >seq32659 Length=1000 Score = 134 bits (148), Expect = 6e-27 Identities = 282/408 (69%), Gaps = 12/408 (3%) Strand=Plus/Minus Query 60150 ACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTCACGCTTGGTATCC 60209 || || || || || ||||| || ||||| ||||||||||| ||||| ||||||||||| Sbjct 492 ACGCCGAGCGACAGGGTCTTGATGCGGATTTTCTCGTCGGCATTTTCGCGCTTGGTATCG 433 Query 60210 AGGAA-CGCAAGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCCTGCGCCCTGCCT 60268 ||||| ||| | ||| || |||||||| || | || ||| ||||| || || ||||| | Sbjct 432 AGGAAGCGC-ATGATATCCGGGTGGTGGGCATGCAGATAGACCGCGCCGGCACCCTGACG 374 Query 60269 TGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAGAATCTTCATCACAGGGATGAC 60328 || || || ||||| | ||||| || |||||| || | |||||||| || || || Sbjct 373 CGCGCCAAGCTGGTTGGCATAGGAAAACGAATCTTCCAGCAGTTTCATCACTGGAATAAC 314 Query 60329 TCCAGAGGCCTGACCTTCTCGACC--CTTAATCGGAGCTCCTGCCTCGCGGAGGTTGGAG 60386 || || | ||| || |||| | || ||||| ||||| ||||| | |||| Sbjct 313 GCCGGACGACTG--GTTTTCGATCTGTTTGATCGGCGCTCCGAATTCGCGAATATTGGTC 256 Query 60387 A-ATCCAATGCCGACTCCGCCACCACGCTTAGACAGCTGGAGAG-AGTCCTGAACGATTC 60444 | || ||| || ||||| || ||||| |||||||| || | | ||| || | Sbjct 255 AGGGACAGCGCC-ACGCCGCCGCCGCGCTTGGACAGCTGCAGGGCCGAATTGATGGA-GC 198 Query 60445 GACCGATGGACCCCATGGTGTCCTGAACATCGAGGATGAAGCATGATACTGGCTTGCC-T 60503 | |||||| |||| |||| | ||| || | || || || || | | || Sbjct 197 GGCCGATGCTTTCCATATTGTCTTCCACACGCAGCAGAAAACACGAGACCAGTTCACCAC 138 Query 60504 GCGTCGAGAAGCCCCGCGTTGAGGAAGGTCGGAGTTGCAGGCTGGAAG 60551 | || | || ||||||||||||||||| ||||| ||||||||| Sbjct 137 GGCTCTTTTTG-CCGGCGTTGAGGAAGGTCGGGGTTGCCGGCTGGAAG 91 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 225515288040800