Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_009816.1
Length=70579
Score E
Sequences producing significant alignments: (Bits) Value
seq32659 134 6e-27
>seq32659
Length=1000
Score = 134 bits (148), Expect = 6e-27
Identities = 282/408 (69%), Gaps = 12/408 (3%)
Strand=Plus/Minus
Query 60150 ACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTCACGCTTGGTATCC 60209
|| || || || || ||||| || ||||| ||||||||||| ||||| |||||||||||
Sbjct 492 ACGCCGAGCGACAGGGTCTTGATGCGGATTTTCTCGTCGGCATTTTCGCGCTTGGTATCG 433
Query 60210 AGGAA-CGCAAGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCCTGCGCCCTGCCT 60268
||||| ||| | ||| || |||||||| || | || ||| ||||| || || ||||| |
Sbjct 432 AGGAAGCGC-ATGATATCCGGGTGGTGGGCATGCAGATAGACCGCGCCGGCACCCTGACG 374
Query 60269 TGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAGAATCTTCATCACAGGGATGAC 60328
|| || || ||||| | ||||| || |||||| || | |||||||| || || ||
Sbjct 373 CGCGCCAAGCTGGTTGGCATAGGAAAACGAATCTTCCAGCAGTTTCATCACTGGAATAAC 314
Query 60329 TCCAGAGGCCTGACCTTCTCGACC--CTTAATCGGAGCTCCTGCCTCGCGGAGGTTGGAG 60386
|| || | ||| || |||| | || ||||| ||||| ||||| | ||||
Sbjct 313 GCCGGACGACTG--GTTTTCGATCTGTTTGATCGGCGCTCCGAATTCGCGAATATTGGTC 256
Query 60387 A-ATCCAATGCCGACTCCGCCACCACGCTTAGACAGCTGGAGAG-AGTCCTGAACGATTC 60444
| || ||| || ||||| || ||||| |||||||| || | | ||| || |
Sbjct 255 AGGGACAGCGCC-ACGCCGCCGCCGCGCTTGGACAGCTGCAGGGCCGAATTGATGGA-GC 198
Query 60445 GACCGATGGACCCCATGGTGTCCTGAACATCGAGGATGAAGCATGATACTGGCTTGCC-T 60503
| |||||| |||| |||| | ||| || | || || || || | | ||
Sbjct 197 GGCCGATGCTTTCCATATTGTCTTCCACACGCAGCAGAAAACACGAGACCAGTTCACCAC 138
Query 60504 GCGTCGAGAAGCCCCGCGTTGAGGAAGGTCGGAGTTGCAGGCTGGAAG 60551
| || | || ||||||||||||||||| ||||| |||||||||
Sbjct 137 GGCTCTTTTTG-CCGGCGTTGAGGAAGGTCGGGGTTGCCGGCTGGAAG 91
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 225515288040800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |