Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq39996 107 2e-18
>seq39996
Length=45000
Score = 107 bits (118), Expect = 2e-18
Identities = 256/381 (67%), Gaps = 6/381 (2%)
Strand=Plus/Plus
Query 10774 CACGGTGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAAT 10833
|||| || || ||| || || ||||| || || || || ||| |||||| | |||
Sbjct 6565 CACGACGACCTGACGGTCGAAACGACCGGGACGCAGAAGTGCGGGGTCAAGAACGTCAGG 6624
Query 10834 GCGGTTCGTCGCCGCGATGACAACGATGCCCGTC--TCGTTATCAAAGCCATCCATCTCA 10891
||||| || || ||||||| | |||||| || ||| || ||||| ||||| ||
Sbjct 6625 ACGGTTGGTGGCGGCGATGAGGATGATGCCT-TCATTCGCC-TCGAAGCCGTCCATTTCG 6682
Query 10892 GTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCACCCGCACTG 10951
|| || || || | || |||||||| || || || || | ||| || |
Sbjct 6683 ACCAGCAGCTGGTTCAGCGTCTGTTCGCGCTCGTCGTTACCGCCACCAAGACCGGCGCCA 6742
Query 10952 CGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGG 11011
|| || ||||||||||| ||||| |||||||| | ||| || ||| ||| | |
Sbjct 6743 CGATGGCGGCCGACGGCGTCGATTTCGTCGATGAAGATGATGCAGGGTGCATTCTTCTTG 6802
Query 11012 GCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAA 11071
|| || || || || || || | | || ||||| || || ||||||||||| ||
Sbjct 6803 GCTTGCTCGAACATGTCACGCACGCGGCTTGCGCCGACGCCGACGAACATTTCCACGAAG 6862
Query 11072 TTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAG 11130
| | ||||| || | || ||| || || |||| |||||| |||| || || || ||
Sbjct 6863 TCCGAACCGGAA-ATGGTGAAGAACGGCACATTGGCTTCACCGGCGACGGAACGCGCCAG 6921
Query 11131 GAGGGTCTTCCCCGTCCCAGG 11151
|| ||||| ||||| || ||
Sbjct 6922 AAGCGTCTTACCCGTACCGGG 6942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596776257745600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |