Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_010583.1
Length=111382
Score E
Sequences producing significant alignments: (Bits) Value
seq66703 196 3e-45
>seq66703
Length=1304
Score = 196 bits (216), Expect = 3e-45
Identities = 449/670 (67%), Gaps = 20/670 (3%)
Strand=Plus/Minus
Query 50861 TGATCTTCATAGATATGAAGATTAATAATCTTTTGACGAGCAATACCTGGCTTAAGACCT 50920
||||||||||| ||||| ||| | ||||| ||| ||| | || | || | ||
Sbjct 799 TGATCTTCATAAATATGTGCATTTACGATCTTATGATAAGCTTTTCCGGCCTCGTGGCCC 740
Query 50921 GTAATCTGTGCCATAATAGCTAGAAGTGCATAGCATTGCACCATATTAAATACTTGGCCC 50980
||||| || ||||| | |||||| | | | | ||| | | |||||| ||| ||
Sbjct 739 GTAATTTGAGCCATGAGAGCTAGTAAGGTAAACACTTGAATCTGATTAAAATTTTGACCT 680
Query 50981 AGCAAGAAATCATTAGACCTCTGGAAAGAGTTTAGGTATAGTGTATCACCTAAAATAGAG 51040
| | |||| || | || | || | | || || | ||||||| | ||
Sbjct 679 AATGGTACATCACATGAACGTTGTGATGAAGTCAAATAAAGCTTGCCACCTAACAACGAA 620
Query 51041 AATTGATGGGTATGCATACACGGACGTAGGCATCCTTTACGAAATTCCCCACGGGTTCCA 51100
||| ||| ||||||||||| ||||||| ||||| || |||| || || || || |
Sbjct 619 AATGTATGAGTATGCATACAAGGACGTAAACATCCCATATGAAACTCACCT-GGATTGTA 561
Query 51101 AAAG-TTAAAATTTCTCCACGATCGTCAATCCCTCTTTTCAAATTATGATAGACTTTGGC 51159
||| ||| |||||| || || || ||||| || || ||| |||| ||||| ||
Sbjct 560 GAAGGTTAGAATTTCACCTCGGTCATCAATACCGTTTCGCAAGTTATCATAGATCTTATG 501
Query 51160 TAACTGATCAAATACCATACCATCAGAATTAGTCCAATGACGTCCTTGAACACCATAGAC 51219
| ||| ||||| || || | |||||| ||| || || || |||||||| ||
Sbjct 500 AAGCTGGTCAAACTCCTCTCCTACTGAATTACGCCACCTGCGCCCCTGTACACCATAAAC 441
Query 51220 TCGTCCCATATCATCCTCGCCTTTACGGAATGGATTACCTAGCCAGGCAATATTTTCATT 51279
||| ||||||||||||| |||||||| | |||||| ||| ||| || |||||||||
Sbjct 440 TCGGCCCATATCATCCTTACCTTTACGATAAGGATTAGCTAACCAAGCTTCATTTTCATT 381
Query 51280 TGCATTAGCATTCCATGTATTAACACCAATAGCGCGGAATTGTGCTGCTGAGTCGTACCC 51339
|||||||| |||||||||||| |||||||| || || || ||||| || || ||
Sbjct 380 GGCATTAGCGTTCCATGTATTACATCCAATAGCTCGAAACTGAGCTGCGCTATCATAACC 321
Query 51340 ACGGAGATATCCGATCATTTCCATTATTGCTTGTTTAGCAAATGCT-TTACGAGTAGTTA 51398
||| ||||| || | | ||| || || || || ||| || || ||||||||||
Sbjct 320 ACGTAGATACCCTAATAATTCTGCGATAGC-TGCTTTCCAATAACTCTTTCGAGTAGTTA 262
Query 51399 CTA--GCG-GCAGT-----------TCTCCT--GCTCCTACGTTAAAGGTAAAGTCTGCA 51442
||| || | ||| ||| | || |||||||| | || || |||
Sbjct 261 CTAAGNCGAGTAGTCACTAAAGGAAACTCATTAGCGCCTACGTTGTATTCTAAATCAGCA 202
Query 51443 TCAATAATGGTTAGGCAACGAACCCCTGTTCTAGGATTCGTTACCCATACACCCTCTTCA 51502
| ||||| ||||| |||||| || || | |||| |||||||||||||| |||
Sbjct 201 TTAATAACGGTTAAGCAACGCTTTCCAGTCCGTTCATTCTCGACCCATACACCCTCATCA 142
Query 51503 AGAATACGTT 51512
| |||||||
Sbjct 141 ACTATACGTT 132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355961847410360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |