Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq75383 93.3 4e-14
seq42836 89.7 5e-13
seq36501 87.8 2e-12
>seq75383
Length=1910755
Score = 93.3 bits (102), Expect = 4e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||| || || ||||||||||| || || ||| || || || ||||| |||| |
Sbjct 168971 GACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCA 168912
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | | ||| ||||| || || || |||||||| || || || || |
Sbjct 168911 AAGATCAACCTCTGCTGGTCTGGGGGGATGCCTTCTTTTTCTTGTATCTTCACCTTGACA 168852
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| ||| ||||||||| | || | ||||||||||| || || |||
Sbjct 168851 TTCTCGATGGTGTCACTCGGCTCCACCTCCAGAGTGATGGTTTTACCAGTGAGGGTCTTT 168792
Query 138601 ACAAAAATCTGCAT 138614
||||| ||||||||
Sbjct 168791 ACAAAGATCTGCAT 168778
>seq42836
Length=1893264
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/214 (70%), Gaps = 1/214 (0%)
Strand=Plus/Minus
Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461
||| |||||||| | | ||||||||||||||||||||||| || |||||| ||
Sbjct 1011597 CAACACTAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATC 1011538
Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521
|| | ||| || || | | |||| || | || ||||| ||||| || ||||| || ||
Sbjct 1011537 TTCCACTTGCTTCCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATC 1011478
Query 138522 GGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581
||| || ||| | ||| | || || | | ||| |||| || || | ||
Sbjct 1011477 CTGGATCTTGACCATTACATCTTCTATTGTTTCCGAGGGCTCGACCTTGAGAGTGATGGT 1011418
Query 138582 TTTACCAGTC-AGAGTTTTTACAAAAATCTGCAT 138614
|| || ||| ||||| || ||||||||||||||
Sbjct 1011417 CTTCCCTGTCAAGAGTCTTCACAAAAATCTGCAT 1011384
>seq36501
Length=2370580
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 153642 TACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTG 153701
|||| ||| || || | ||| |||||||||||||| ||| ||||| || ||||| |||
Sbjct 2283008 TACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAAGTTCTGCTGGTTG 2282949
Query 153702 CTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739
|| || ||||| || | |||||| |||||||||||||
Sbjct 2282948 CTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGG 2282911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495782762390400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |