Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_012783.2
Length=226205
Score E
Sequences producing significant alignments: (Bits) Value
seq72786 152 7e-32
>seq72786
Length=644084
Score = 152 bits (168), Expect = 7e-32
Identities = 176/237 (74%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 9726 GATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAG 9785
|||||| | | || || ||||||||||| || |||||||| || || || ||||| ||
Sbjct 78541 GATTAGCCTGCTTGTCTGGAACAACTGCTCATCGCCCCATTCTGGATGCTCTTGTTTAAG 78600
Query 9786 AACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGG 9845
||||| || || ||||||||||| | |||||| |||||||| |||||||| | ||| ||
Sbjct 78601 CACATCACACACTCTGTTGTGTTCCCGCAGCCAAATGGTGGCATACATCATCAGACCAGG 78660
Query 9846 CACTAAACCAAACACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGC 9905
||| | |||||| || || | ||||| ||||| || | || || | | ||||
Sbjct 78661 CACCAGACCAAAGACCTCCTGGCCCACAGCAAACTTCAAGTGTTCAGGAATATGAGGCGG 78720
Query 9906 ATACAGCATATGCACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAAT 9962
|| | ||| | ||||| || |||||||| ||||| |||||||| || || | |||
Sbjct 78721 GTAGATCATTTCAACCTGAGTATCTTTGACAGTGGGAGGATACATCTCTCCATTAAT 78777
Score = 95.1 bits (104), Expect = 2e-14
Identities = 127/177 (72%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 10121 TCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGTCCTAAA 10180
||| |||||||| | ||| | |||||||| |||||||| | | ||| ||| | ||
Sbjct 79562 TCTCACCCCATGGTTCTTTCCCTTAGTGAAAGCTGGTCCTCGTTCAAAATCTGTCTTGAA 79621
Query 10181 AAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTGGGGATC 10240
|||||| || || ||||| || | || || || |||||||| || ||||||||||||||
Sbjct 79622 AAATTGATGGGTGAAGTGCTGGGCAAAGAATGCAAACATCAGATTTGTGCCCTGGGGATC 79681
Query 10241 GGGGATAAAGGTCCTCCGAATAAAAACTTTGTCCACAATCTGTGTTGAATCGGGCAG 10297
|| || || | || | | || ||||| | ||||| | | | ||||| || ||
Sbjct 79682 AGGAATGAACTTTCTTCTTAGAAGTACTTTTTTCACAACTTCTTTCGAATCAGGAAG 79738
Score = 95.1 bits (104), Expect = 2e-14
Identities = 81/100 (81%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 10387 TCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTA 10446
||||||||||| || | || || ||||||||| ||| || ||||| |||| ||| |||
Sbjct 80395 TCACCTTTCACACCCATGGGTGTTGGGCAGTCATCAGGCACAGGAGGAAGAGCTCTGGTA 80454
Query 10447 TAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGC 10486
|||||||| || || ||||| ||||||||||| || ||||
Sbjct 80455 TAATAGGACAGGTTAGAAAAGGCTTCCCAGCTTTTATAGC 80494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 723028516888000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |